Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00906 ATGAGCTTCAAAAGGGACCTTGAGCTTGTCGTCTTTGTTTTCTCTGCAGTCTTCTGGTTTGCAGCGAACGTTTATCCGGTGATGTCGGAGCCCATCAAAGACAAGGAAGCTTTGCTTAATTTTCTCAACAAGATGGATCACTCACACTCGCTCAATTGGAAGAAGAGCACTTCTTTGTGCAAAGAATGGATGGGAGTTCAATGCAACAATAATGAATCCCAAGTTGTAGTTCTTAGATTGGCTGAAGTTGGCTTACACGGTTCGATCCCGATCAACACTCTCGGTCGGCTATTGGGACTTGAAACTCTAAGCCTTGGATCAAATTACATATCAGGGCCTTTCCCTTCTGACTTCCTAAAGCTGAGAAATCTCAGTTCACTCTACTTGCAAAACAACAAGTTCTCCGGTCCATTGCCATTGGATTTCTCTGTATGGAAGAATCTCAACATCATCGATCTGTCAAACAATGCCTTCAATGGGAGCATCCCTCGCTCGATTTCGAACACGACACATCTAACGACATTAAACCTTGCCAATAACTCACTCTCTGGTGAGATTCCAGACAACCTTCCTAGTTTGCAAGAGTTGGATCTTTCAAACAACAATCTCACAGGGTATGTCCCTCAGTCCCTTAAAAAATTTCCAAGTTGGGCATTCTATGGTAACAACCTCATGCTAAAAAATGCCGTTTCTCCGGCTCACGAACCGGTGCCGAGTACTCGACCATTGAAGAAAGGCACAACATCACTTGGTGAAGCAGCAATTTTAGGCATTATAATTGGAGGTTCTGCAACGGGGTTAGTCATAGCAGTCATTTTGATGGTTATATGTTGCTCAAACAGAGGAAGACTAAAAAACAAAGCCTCATCAAAGCTGGACAAGCAAGAACAGTTTGTGAACAAAAGGGTGTCTGAGACAAAAAACAACAACCTCAAGTTTTTTCGGAGTCACGGCCTCGAGTTCGACTTGGAGGACTTGTTGAGGGCGTCTTCCGAGGTGCTCGGGAAGGGGATGTCGGGGACGACGTATAAGGCGACACTAGAAGACGGCAATGCCGTGGCAGTGAAGAGGTTGAAGGAAGTGTGTGTTTCAAAGAAGGAATTTGAGCAACAGATGGAGGTGCTTGGGAGCATTGATCATGAAAATGTGTGTGGTCTAAGGGCATATTATTATTCAAAGGATGAGAAACTCATGGTGTTTGAGTTCTATCAACATGGAAGTGTCTCTGCAATATTGCATGTTGCGAGAGAGAAAGGACAGTCACCTCTAGATTGGGAAACTCGACTCCGAATCGCCATTGGCGCAGCCAGAGGAATCGCTCACATCCACTCTGAAGCCTGCGGCAAGCTCGTCCATGGAAACATCAAGGCCTCAAACGTTTTTCTCAACTCCGCCGGTTACGGATGCATTGCCGACGTCGGCGTTGCCGCTCTGATGAACCTCATGGCCCCGGCGGCAACCAGAGCCGCCGGATACCGCGCTCCCGAACTCAAAGATTCACGCAAAGCGTCTCAAGCCTCCGATACCTACAGCTTCGGCGTCGTGCTTCTGGAACTCCTCACTGGAAAATTTCCACTGCATACGAAGTGTGGCGGCGGCGGCGGCGGGGATCAGATCATCCACCTTGTGCGGTGGGTGAACGCGGTGGTTCGAGAGGAGTGGACGGCGGAGGTATTTGATGTGGAGCTTTTGAGATATCCGAACATAGAGGAGGAGATGTTAGAGACGCTGCAAATAGCGCTATCTTGTGTAGGAAGAGTTCCGGATGATCGGCCGTCAATGGCGGATGTGGCAGCTCGGTTAGAGGGAGTTCGCCAGGTGAGCGGCGGAGGAAACCAACCGGCGCCGCCGCCAGCATTGCCACGTGGAGCGGAGGAGGTGATCCAGATTCAGGTGAATGTGGATGAGGGTGAAGAGGGAGCTCCGTCGAAATCGAATTGA 1941 48.89 MSFKRDLELVVFVFSAVFWFAANVYPVMSEPIKDKEALLNFLNKMDHSHSLNWKKSTSLCKEWMGVQCNNNESQVVVLRLAEVGLHGSIPINTLGRLLGLETLSLGSNYISGPFPSDFLKLRNLSSLYLQNNKFSGPLPLDFSVWKNLNIIDLSNNAFNGSIPRSISNTTHLTTLNLANNSLSGEIPDNLPSLQELDLSNNNLTGYVPQSLKKFPSWAFYGNNLMLKNAVSPAHEPVPSTRPLKKGTTSLGEAAILGIIIGGSATGLVIAVILMVICCSNRGRLKNKASSKLDKQEQFVNKRVSETKNNNLKFFRSHGLEFDLEDLLRASSEVLGKGMSGTTYKATLEDGNAVAVKRLKEVCVSKKEFEQQMEVLGSIDHENVCGLRAYYYSKDEKLMVFEFYQHGSVSAILHVAREKGQSPLDWETRLRIAIGAARGIAHIHSEACGKLVHGNIKASNVFLNSAGYGCIADVGVAALMNLMAPAATRAAGYRAPELKDSRKASQASDTYSFGVVLLELLTGKFPLHTKCGGGGGGDQIIHLVRWVNAVVREEWTAEVFDVELLRYPNIEEEMLETLQIALSCVGRVPDDRPSMADVAARLEGVRQVSGGGNQPAPPPALPRGAEEVIQIQVNVDEGEEGAPSKSN 646
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 6443214 6447572 - Carg14036-RA Car02g00906 143392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00906 646 Pfam Protein kinase domain 331 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g00906 646 Pfam Leucine Rich Repeat 192 214 IPR001611 GO:0005515
Car02g00906 646 Pfam Leucine rich repeat N-terminal domain 33 69 IPR013210 -
Car02g00906 646 ProSiteProfiles Protein kinase domain profile. 328 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g00906 646 ProSitePatterns Protein kinases ATP-binding region signature. 334 356 IPR017441 GO:0005524
Car02g00906 646 MobiDBLite consensus disorder prediction 605 624 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00906 Car-Chr2:6443214 Car02g01181 Car-Chr2:8039599 0 dispersed
Car16g00071 Car-Chr16:459309 Car02g00906 Car-Chr2:6443214 0 wgd
Car18g01209 Car-Chr18:11665514 Car02g00906 Car-Chr2:6443214 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88669 PF00069 Pkinase 7.80E-32 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00906 - - csv:101219980 1018.84