Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00918 ATGACTTATCTGCAGGAGAAGATTGTGCGGTTTCCGGACCGGAGTTCAGATAAAACTTCAATGGGGTTATATTCTGCGGATAACACTTTAAATGTCGGAATAAATGGGACAAGAGCTGACTTAGTTTCAGAAAAGCCTCACAAAGAATTGGAAACTGGTTCTTACAGGATTAATAGAATTAAGAAATCCTTGAAATCATCTTCTTTCAATAAATTTATGTCCAAAAGTTTTGGAACACGAAGACAAGTACTTGATCCACAGGGGCCCTTTCTCCAGAAGTGGAATAAGATATTTGTGTTGTCTTGTGTGATTGCAGTCTCGTTGGATCCTTTGTTCTTTTATGTCCCTGTGATGGACGATGATCAGAAATGTCTTGGGTTGGATAAGAAGATGGAGATTACGGCTAGTGTGTTACGTTCATTCACCGACATATTTTATATATTACATATTGTTTTGCAATTTCGTACGGGATTTATTGCTCCTTCTTCTCGAGTATTTGGAAGAGGTGTTCTAGTTGAAGATGCTTGGGCAATAGCAAAGAGATATCTGTCGTCATACTTTTTGATCGACATTCTTGCAGTCCTCCCACTTCCACAAGTAGTGATCCTGATAATTGTTCCAAACATGAGAGGCTCGAGGTCGTTGAATACCAAGGACTTGCTGAAATTCATTGTTTTCTTCCAATACGTGCCTCGGTTTATTAGAATCTATCCTTTATATAAAGAAGTTACAAGAACATCTGTACTCACTGAAACTGCATGGGCTGGAGCTGCATTTAATCTCTTTCTTTACATGCTGGCAAGTCATGTCTTTGGAGCATTCTGGTACTTGTTTTCAATAGAACGGGAAACTACATGCTGGCAGCAGGCCTGTCACAATATCAGCTGTGATTCTAATACACTATATTGTGATGTGGCTGTCAATCTACGAAATAACTCGTTTTTAAACATTTCATGTCCGCTAGTGGATGGAGACGAAGTCAAACCTCCTTTTGATTTTGGGATATTTCTTGATGCTCTTAATTCTCGTGTTGTTGAGTCGATGAATTTTCCACAGAAGTTCTTTTACTGTTTCTGGTGGGGTCTGAGAAATCTAAGGTATGTGCACTGCTCATATTACAAATTTTCAGTATGTGCTCAGAGCTATAGTTAG 1152 38.89 MTYLQEKIVRFPDRSSDKTSMGLYSADNTLNVGINGTRADLVSEKPHKELETGSYRINRIKKSLKSSSFNKFMSKSFGTRRQVLDPQGPFLQKWNKIFVLSCVIAVSLDPLFFYVPVMDDDQKCLGLDKKMEITASVLRSFTDIFYILHIVLQFRTGFIAPSSRVFGRGVLVEDAWAIAKRYLSSYFLIDILAVLPLPQVVILIIVPNMRGSRSLNTKDLLKFIVFFQYVPRFIRIYPLYKEVTRTSVLTETAWAGAAFNLFLYMLASHVFGAFWYLFSIERETTCWQQACHNISCDSNTLYCDVAVNLRNNSFLNISCPLVDGDEVKPPFDFGIFLDALNSRVVESMNFPQKFFYCFWWGLRNLRYVHCSYYKFSVCAQSYS 383
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 6511197 6515070 + Carg14023-RA Car02g00918 143404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00918 383 Pfam Ion transport protein 94 365 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00918 Car-Chr2:6511197 Car06g00860 Car-Chr6:6707727 4.65E-101 dispersed
Car14g01909 Car-Chr14:14674545 Car02g00918 Car-Chr2:6511197 1.32E-101 wgd
Car18g01221 Car-Chr18:11742365 Car02g00918 Car-Chr2:6511197 7.99E-68 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00918 K05391 - csv:101221781 643.269