Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00926 ATGAACAACTACAACAAGCTCCACTCCTCCGCCTCCGGCGACACGCCGGCCACCTTCCAAGTTTCTCATACTCCCAATCCACCGTCCTCCTCCGCCTCACGCCGCCGCACCCGAATTCTCTTCGTTTCCCTTATCTCGATCCTTCTCATCACTGCGTCCGCCGTCTCGGCCGCCGTCCTCATCCATTCCCACACCTCCCATTTCCCCCACAACAAACCAACCCAAGCCATCTCTCACGCCTGCAGCCACACTCTCTACCCTTCTCTCTGCCGCTCTTCTCTCCTCTCCTTCCCCGGCTCGCTCTCCGCCGACGTCCACCGCCTCGTTCATATCTCTCTCAACCTAACTCTCCAACATCTCACTAAAGCCCTCTACGCCTCTTCTCAAATCCCCGTTTTTCAAATCTCCAATAACCCTTTAGCTCACTCTGCTTACCAAGATTGTATTGAGCTTCTAAACGACGCCGTTGATGCCTTCTCTCTCTCTCTCTTCTCCACCTCAGCTTCTAACCATGACATCATGACGTGGCTTAGTGCTGCGTTGACTTATCATGACACGTGTAGTGATGGATTTGCGGATGTGGATGACCCGGTCAAGGATCAAATGGCGGCGAGGCTGAGTGATTTGTCGGAGATGATTAGTAATTCTTTGGCTATTTTTTCTGGGTATGGTGAGGAGTTGCCGGTGCAGAACAGGCGGCGGTTGATGGAGAGTGATAGGGAGTGGGTGGCGGAGAATGGTGTCGCGGTGGCGGAGGGGGAGTTTCCCGGGTGGGTTAGTGGGAAAGATAGGCGGCTTTTGGCTGCTCCCATTTCGGCCATTCAGGCGGATATTGTTGTTGCAAAGGATGGGAGTGGGAAGTTCACGACGGTGGCGGAGGCCATTGAGGCGGCGCCGTCGTCTAGTGGTCGACGAATCGTTATCTACATTAAGGCTGGAAAGTACGAAGAAGAGAATTTGAAGGTGGGAAGGAAGAAGACAAACTTGATGTTTGTGGGAGATGGGAAGGGCATAACCGTCATTTCAGGTGGCAAAAGCGTTTTTGACAAAGTTACCACTTTTCGCACCGCCACCTTTGGTATATACTCTCCATCTCTTTTTTCAATTTTATTCCAAAACTTTTTTCTTTTTTTAATTCTTATGAATTAA 1149 51.17 MNNYNKLHSSASGDTPATFQVSHTPNPPSSSASRRRTRILFVSLISILLITASAVSAAVLIHSHTSHFPHNKPTQAISHACSHTLYPSLCRSSLLSFPGSLSADVHRLVHISLNLTLQHLTKALYASSQIPVFQISNNPLAHSAYQDCIELLNDAVDAFSLSLFSTSASNHDIMTWLSAALTYHDTCSDGFADVDDPVKDQMAARLSDLSEMISNSLAIFSGYGEELPVQNRRRLMESDREWVAENGVAVAEGEFPGWVSGKDRRLLAAPISAIQADIVVAKDGSGKFTTVAEAIEAAPSSSGRRIVIYIKAGKYEEENLKVGRKKTNLMFVGDGKGITVISGGKSVFDKVTTFRTATFGIYSPSLFSILFQNFFLFLILMN 382
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 6557197 6558864 + Carg14015-RA Car02g00926 143412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00926 382 MobiDBLite consensus disorder prediction 1 32 - -
Car02g00926 382 Pfam Pectinesterase 277 363 IPR000070 GO:0030599|GO:0042545
Car02g00926 382 Pfam Plant invertase/pectin methylesterase inhibitor 76 219 IPR006501 GO:0004857
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00926 Car-Chr2:6557197 Car17g01016 Car-Chr17:8060470 7.37E-52 dispersed
Car20g00926 Car-Chr20:10040547 Car02g00926 Car-Chr2:6557197 2.20E-25 transposed
Car15g00960 Car-Chr15:7028201 Car02g00926 Car-Chr2:6557197 0 wgd
Car16g00047 Car-Chr16:328292 Car02g00926 Car-Chr2:6557197 1.15E-121 wgd
Car18g01228 Car-Chr18:11816241 Car02g00926 Car-Chr2:6557197 4.43E-100 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00926 - - csv:101216816 509.605