Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00943 ATGGCTTCCGATCCGAAGGTTCATCTGTTCGAAGAAGTGGCAAAGCATAACAAAACGAAGGATTGTTGGCTTGTAATCTCTGGAAAGGTTTATGATGTAACTCCTTTCATGGAGGATCACCCCGGTGGCGATGAAGTATTGTTGTCTGCAACGGGAAAAGATGCCTCGAACGATTTCGAGGATGTCGGGCACAGTGATTCAGCAAGAGAAATGATGGACAAATACTACATCGGAGAAATTGATCCTTCGACGGTTCCTTCGAAGAAGATTTACATTCCATCACAACAAACCCAGTACAATCAAGATAAGACGCCCGAGTTTGTGATCAAGATCTTGCAGATACTGGTTCCCATATTTATTTTGGGTTTGGCATTTGCCGTTCGACACTACACCAAGAATGAATGA 405 43.46 MASDPKVHLFEEVAKHNKTKDCWLVISGKVYDVTPFMEDHPGGDEVLLSATGKDASNDFEDVGHSDSAREMMDKYYIGEIDPSTVPSKKIYIPSQQTQYNQDKTPEFVIKILQILVPIFILGLAFAVRHYTKNE 134
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 6663140 6665394 + Carg13998-RA Car02g00943 143429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00943 134 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037
Car02g00943 134 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Car02g00943 134 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Car02g00943 134 PRINTS Cytochrome B5 signature 55 62 IPR001199 -
Car02g00943 134 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
Car02g00943 134 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
Car02g00943 134 PANTHER CYTOCHROME B5 1 132 - -
Car02g00943 134 Pfam Cytochrome b5-like Heme/Steroid binding domain 11 80 IPR001199 -
Car02g00943 134 PANTHER CYTOCHROME B5-LIKE 1 132 - -
Car02g00943 134 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 4 86 IPR036400 -
Car02g00943 134 SMART Cyt_b5_2 8 81 IPR001199 -
Car02g00943 134 Gene3D - 1 87 IPR036400 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car02g00943 Car15g00942 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00943 Car-Chr2:6663140 Car14g01692 Car-Chr14:13456992 1.32E-69 dispersed
Car14g01928 Car-Chr14:14765753 Car02g00943 Car-Chr2:6663140 3.47E-47 wgd
Car15g00942 Car-Chr15:6720301 Car02g00943 Car-Chr2:6663140 9.14E-95 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00943 K23490 - csv:101207109 262.307