Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00962 ATGATGAAGCAATGGGGAGGCACAGATTCAGAATCTGTTGCAACCTTATGGACATTGTGTGCGGCTCTGGCTTTTGCGATAGCTCCAATCGTTGGATCAGTTTCATCATCAAATCACCAGTTTCGTGGAATTTCTCCCCAAGATGTGATGTATTACAAATCGTCCGACGTGATCAAATGTAGAGACGGTTCCAACAAATTTACCAAGGCTCAGCTTAACGATAACTACTGCGATTGCCCTGATGGCACTGACGAACCTGGCACATCCGCATGCCCAAATGGAAAGTTCTATTGTCGAAATGCTGGGCACGTTCCACTTTTGCTGTTTTCTTCAAGGGTGAACGACGGTATATGTGATTGTTGTGATGGAAGTGATGAATATGACAACAAAGTCAAATGCCCAAATACATGCTGGGAAGCTGGGAAAGTGGCTAGAGATAAGTTGAAGAAAAAGATTGCCACCCTTGAAGAAGGTTTTAAAATTCGTAAAGTAGAAGTTGAACATGCGAAAGTCGCAATAACTAAGGATGAGGCAGAGCTATTGAAGTTGCAAAACGAGGAAAAAGTATTAAAAGGGCTCGTGGAACAACTTCAAGAGCGCAAAGAACAAATAGAGAAGTTAGAAGAAGAGGAGCGATTATGGAAAGAGAAAGAAGAGAAGAAACATTTGGAGAGAGAAAAAGATGAGACTAAAAAAATTGAATCGACAGAAACAGCCGATGTTGGGGAAAGCAAAACTGAAGAGAAAGACAATTCGGTAAAAGATGAAGCTACAGAAAATGGTGCCGAGGAATATAAAGGAGAAGGCAATGGAGATGATAGAAGTGGGAACTGGGAGGACTCTGCAACAAATGAGGGTAGGGTGGAAGAAGCAGTTGACTCAGAATTTGAAGTTCAGCTTCCTAATAAACCGGAAACAGGAGCATCAATGCCGAAAGACATAGAAGAGGATACAGCATTAGAGAAAGACAAACCCCTGGCTAAATCTGAAACTGGAGAAAGTGTCGGCTTTAGAGAATCATCTGAAGAAGTCCTGCAAAAGAATGATGCTAATTCAGAGTTATCACGGGAAGAGTTGGGCCGCCTTGTTGCTTCTCGTTGGACCGGAGAAAATACTGAAGAACAGTCAGGGAATGCGGAAAGCACGAATGACAGTGATGAAGAAAGTCATGATATCTTAAAAGACACACACGACAATGACGGTTATGCTTCAGACACTGATGGTGAGCACCAAAAATACGACGATGACAACCAAAGATATGATGATGATCTAGAGGATGATTTATATGATATCAGAGATGAAAATCATGATGAGTCTACTTCGTCAGAGAGATATTATTCAGATTCAGAATTGGACTCACCAGATATGGAAACCAAAAGTACCTCCACCTGGCTTGAGAAGATACAAAGAACCGTTCGAAATGTCCTCAAAGCTGTTCATATATTCCAGCCTCCAGTGAACCAATCAGATGCTGCAAACATTCGCAAGGAATATGATGAATCCAATGCCAGGTTATCAAAAATACAGTCAAGGATCTCAAGTTTATCACAGAAGCTGCAGAATGATTTTGGTCCAGAGAAGGAGTTCTATTCATTTTATGACCAATGTTTTGAAAGCAAGAAAAACAAATACACTTACAAAATCTGCCCTTACAAACAAGCTTCACAAGTCGAGGGGCACTCGACAACTCGTTTGGGGCGCTGGAGTAAATTTGAGGACTCATATGGGGTTATGATCTTTTCAAGTGGGGATCATTGCTGGAATGGACCTGATAGAAGCTTGAAGGTCAAGCTAAGATGTGGGCTTAAAAATGACATAACCGACGTAGACGAGCCAAGTCGTTGCGAATACACGGCACTTCTATCAACCCCAGCCGCTTGTGTAGAGGAAAAACTTCAGGAACTGAAAAACAAGCTGGAGATGCTGAATAAAGAAGAGCCAGAGAAGCATGATGAGCTTTGA 1962 41.9 MMKQWGGTDSESVATLWTLCAALAFAIAPIVGSVSSSNHQFRGISPQDVMYYKSSDVIKCRDGSNKFTKAQLNDNYCDCPDGTDEPGTSACPNGKFYCRNAGHVPLLLFSSRVNDGICDCCDGSDEYDNKVKCPNTCWEAGKVARDKLKKKIATLEEGFKIRKVEVEHAKVAITKDEAELLKLQNEEKVLKGLVEQLQERKEQIEKLEEEERLWKEKEEKKHLEREKDETKKIESTETADVGESKTEEKDNSVKDEATENGAEEYKGEGNGDDRSGNWEDSATNEGRVEEAVDSEFEVQLPNKPETGASMPKDIEEDTALEKDKPLAKSETGESVGFRESSEEVLQKNDANSELSREELGRLVASRWTGENTEEQSGNAESTNDSDEESHDILKDTHDNDGYASDTDGEHQKYDDDNQRYDDDLEDDLYDIRDENHDESTSSERYYSDSELDSPDMETKSTSTWLEKIQRTVRNVLKAVHIFQPPVNQSDAANIRKEYDESNARLSKIQSRISSLSQKLQNDFGPEKEFYSFYDQCFESKKNKYTYKICPYKQASQVEGHSTTRLGRWSKFEDSYGVMIFSSGDHCWNGPDRSLKVKLRCGLKNDITDVDEPSRCEYTALLSTPAACVEEKLQELKNKLEMLNKEEPEKHDEL 653
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 6770560 6780139 - Carg13979-RA Car02g00962 143448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00962 653 Coils Coil 166 233 - -
Car02g00962 653 MobiDBLite consensus disorder prediction 218 460 - -
Car02g00962 653 Coils Coil 491 518 - -
Car02g00962 653 Coils Coil 625 652 - -
Car02g00962 653 MobiDBLite consensus disorder prediction 218 296 - -
Car02g00962 653 MobiDBLite consensus disorder prediction 383 418 - -
Car02g00962 653 Pfam Glucosidase II beta subunit-like 33 173 IPR028146 -
Car02g00962 653 MobiDBLite consensus disorder prediction 309 360 - -
Car02g00962 653 ProSiteProfiles MRH domain profile. 534 629 IPR044865 -
Car02g00962 653 Pfam Glucosidase II beta subunit-like protein 495 646 IPR036607 -
Car02g00962 653 MobiDBLite consensus disorder prediction 433 455 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00174 Car-Chr1:949849 Car02g00962 Car-Chr2:6770560 1.17E-24 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00962 K08288 - csv:101221877 966.452