Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00982 ATGAGAAGATCGGGCGTAAACCAACCGAAAGTGAAGCGTCTTGTTGGAAAATATGAAATCGGTCGAACGATTGGTGAGGGTACATTTGCAAAAGTGAAAATAGCCAAAAATTCTGAAAATGGGGAACATGTAGCAATAAAGATCCTTGACAAGGAGAAAGTTCTGAAGCACAAGATGGCTGAACAGATCAAGCGGGAAATAGCGACAATGAAACTAATAAAGCATCCACATGTCGTTCAATTGTTCGAGGTTATGGGGAGCAAAACAAAGATATTCATTGTTTTGGAGTTCGTTACCGGAGGCGAACTTTTTGATAAAATTGTAAATCATGGACGGATGACCGAAAGTGAGGCACGGAGATATTTTCAGCAACTTATAAACGCGGTTGATTATTGTCATAGCAGAGGTGTTTACCATAGGGATCTTAAGCCTGAAAATCTATTGTTAGATGCCAAAGGAAATCTTAAAGTGTCTGATTTTGGATTGAGTGCACTGTCACAACAAGTTAAGGACGATGGCCTGCTTCACACTACTTGTGGAACTCCAAACTATGTTGCTCCTGAGGTCCTTAACGATAGAGGCTATGACGGAGCGACTGCAGACTTATGGTCATGTGGAGTCATACTCTTTGTACTGCTTGCAGGTTACTTGCCTTTTGATGATTCTAATATCATAAACCTTTATAAAAAGATCTCGGCCGCTGAATTTACTTGTCCTCCATGGCTTTCTTTAGATGCCATGAAATTGATCGCTCGAATTTTGGATCCGAACCCAATGACTCGCATCACCGTACCAGAAATTTTGGAAGATGAATGGTTTAAGAAAGATTATAAGCCCCCGGTTTTCGAGGAGCCTAAGATTGCGAACTTAGATGATGTAGAAGCAGTCTTCAAAGATTCAGAAGAGCACCATGTGACAGAGAAGAAGGAAGAACAACCTGTAGCCATGAACGCCTTCGAGTTAATTTCAATGTCGAAGGGGCTCAACCTGGAAAATTTGTTTGGTACAGAACAGGAATTCAAGAGAGAAACCAGGTTCACCTCTAAATGCTCAGCTAATGAAATTGTAAATAAGATTGAAGAAGCTGCCAAACCTCTTGGTTTTGATGTGCAGAAGAAAAATTACAAGATGAGACTCGAAAATGTGAAAGCGGGCCGGAAGGGAAACCTTAATGTTGCCACAGAGATTTTGCAAGTGGCACCTTCTGTTCATGTGGTTGAGATGCGAAAAGCTAAGGGGGACACCTTAGAGTTTCACAAGTTCTACAAAAACCTCTCCACCTCTCTAGAGGATGTTGTTTGGAAGACTGAGGAAGACATGCCAGCAAAAAAGTGA 1335 41.42 MRRSGVNQPKVKRLVGKYEIGRTIGEGTFAKVKIAKNSENGEHVAIKILDKEKVLKHKMAEQIKREIATMKLIKHPHVVQLFEVMGSKTKIFIVLEFVTGGELFDKIVNHGRMTESEARRYFQQLINAVDYCHSRGVYHRDLKPENLLLDAKGNLKVSDFGLSALSQQVKDDGLLHTTCGTPNYVAPEVLNDRGYDGATADLWSCGVILFVLLAGYLPFDDSNIINLYKKISAAEFTCPPWLSLDAMKLIARILDPNPMTRITVPEILEDEWFKKDYKPPVFEEPKIANLDDVEAVFKDSEEHHVTEKKEEQPVAMNAFELISMSKGLNLENLFGTEQEFKRETRFTSKCSANEIVNKIEEAAKPLGFDVQKKNYKMRLENVKAGRKGNLNVATEILQVAPSVHVVEMRKAKGDTLEFHKFYKNLSTSLEDVVWKTEEDMPAKK 444
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 6959053 6966602 - Carg02767-RA Car02g00982 143468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00982 444 Gene3D Phosphorylase Kinase; domain 1 7 97 - -
Car02g00982 444 ProSitePatterns Serine/Threonine protein kinases active-site signature. 137 149 IPR008271 GO:0004672|GO:0006468
Car02g00982 444 Gene3D Kinase associated domain 1, KA1 310 435 - -
Car02g00982 444 SUPERFAMILY Protein kinase-like (PK-like) 14 299 IPR011009 -
Car02g00982 444 CDD STKc_SnRK3 17 272 - -
Car02g00982 444 CDD CIPK_C 317 431 - -
Car02g00982 444 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 3 7 437 - -
Car02g00982 444 ProSitePatterns Protein kinases ATP-binding region signature. 24 47 IPR017441 GO:0005524
Car02g00982 444 Pfam Protein kinase domain 18 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g00982 444 Pfam NAF domain 313 372 IPR004041 GO:0007165
Car02g00982 444 SMART serkin_6 18 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g00982 444 ProSiteProfiles NAF domain profile. 311 335 IPR018451 GO:0007165
Car02g00982 444 PANTHER - 7 437 - -
Car02g00982 444 Gene3D Transferase(Phosphotransferase) domain 1 98 280 - -
Car02g00982 444 ProSiteProfiles Protein kinase domain profile. 18 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00982 Car-Chr2:6959053 Car12g00643 Car-Chr12:4319502 0 dispersed
Car06g01352 Car-Chr6:9681729 Car02g00982 Car-Chr2:6959053 2.06E-151 dispersed
Car08g00146 Car-Chr8:871925 Car02g00982 Car-Chr2:6959053 6.50E-49 dispersed
Car08g00841 Car-Chr8:5631382 Car02g00982 Car-Chr2:6959053 8.92E-92 dispersed
Car14g01370 Car-Chr14:11579298 Car02g00982 Car-Chr2:6959053 2.26E-147 dispersed
Car17g00035 Car-Chr17:161353 Car02g00982 Car-Chr2:6959053 6.73E-92 dispersed
Car02g00982 Car-Chr2:6959053 Car13g00407 Car-Chr13:6590710 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88672 PF00069 Pkinase 6.60E-73 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00982 - - csv:101221173 859.751