Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01021 ATGGATCCGCCTCACCCATCCCCACCGGAGCTTCGTCTTCCTAGTCTCACTACCCTCAAGATACTCGGACAAGGAGCCATGGGGACTGTCTTTCTCGTCCACGACCATCTCCTTGATAGCGCGGCGAATTTCCCCTTTGCGCTCAAGGTCGTCCACAAATCGTCTTTTGTCTCTAAGCACCACGCCGAGCGCCGCGCTCGTTGGGAGATTCAGGTTCTTTCCCGGTTATCTCTCCCTAAACCACACCCGTTTCTTCCTGACCTCATCGGATCCTTCGAGTCCGACGATTTTTTGGGCTGGGCTGTTCCCTACTGTCCTGGTGGGGACCTTAACGTCTTGCGTTACCGCCAAATGGACCGGGTCTTCTCGCCAGCTGTTATTCGGTTTTATTTGGCTGAGATCGTCTGTGCGCTAGAGCATCTTCATAGCATCGACATCGTTTACCGAGATTTGAAGCCGGAGAATGTATTGATTCAACAATCGGGTCATGTCACTCTAACCGATTTTGATTTGTCGCGTCAGTTGACTCGTAAGACAGTGAAAGACGTCGTTTCGATTGATGATTCCGGCCACGAGAAGCTGCCGGTTGTCGCCGCCCGGCGGAACTTTACGCGATGGATTGTGGGGACCGCTAAAGTCAAAAAGGGTTTGAGAAAGGCTAAATCGGCTCGGGTTAGTCCTGTGAGCCGTTGGAAATTGGGTTTAGTAACTAATAATGGCGAGCGGTCGAACTCGTTCGTTGGAACAGAGGAGTACGTTTCGCCGGAGATCATTCGAGGTGAGGGACATGAATTCGCCGTTGACTGGTGGGCCTTGGGAATTCTCACGTACGAGATGCTCTATGGGAAGACGCCGTTTAAGGGGACTAACCGTAAAGAAACGTTTAGGAACGTTCTAGTCAGAGCCCCAGAGTTAATCGGAAAGCGTTCAGATTTAACGGATTTGATCGAACGGTTGCTGGTGAAGGACCCCACCAAGCGGTTGGGGTACACCCGAGGCGCGTGTGAGATCAAAGAGCATGCGTTTTTTAACGGCGTTAAGTGGGACATATTAACGGAAGTCATGCGACCGCCATTTTTACCGGCTCGTGAAGAAACAGGATGGAGGGAGAATAAAGCCCCCGGTGGTGTGGGTATAGAGGAATACTTTCATAGACAGAGATCGCCGCCTTCATTTCCAGCGTCGCCGTCGTCATCTCCGTCAACCTCCTTCCATTTGCACAATAACAGCATATGTTTAGCGGAATTCTAA 1251 51.32 MDPPHPSPPELRLPSLTTLKILGQGAMGTVFLVHDHLLDSAANFPFALKVVHKSSFVSKHHAERRARWEIQVLSRLSLPKPHPFLPDLIGSFESDDFLGWAVPYCPGGDLNVLRYRQMDRVFSPAVIRFYLAEIVCALEHLHSIDIVYRDLKPENVLIQQSGHVTLTDFDLSRQLTRKTVKDVVSIDDSGHEKLPVVAARRNFTRWIVGTAKVKKGLRKAKSARVSPVSRWKLGLVTNNGERSNSFVGTEEYVSPEIIRGEGHEFAVDWWALGILTYEMLYGKTPFKGTNRKETFRNVLVRAPELIGKRSDLTDLIERLLVKDPTKRLGYTRGACEIKEHAFFNGVKWDILTEVMRPPFLPAREETGWRENKAPGGVGIEEYFHRQRSPPSFPASPSSSPSTSFHLHNNSICLAEF 416
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 7176710 7177960 - Carg02728-RA Car02g01021 143507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01021 416 ProSitePatterns Serine/Threonine protein kinases active-site signature. 146 158 IPR008271 GO:0004672|GO:0006468
Car02g01021 416 Pfam Protein kinase domain 18 183 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g01021 416 Pfam Protein kinase domain 238 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g01021 416 ProSitePatterns Protein kinases ATP-binding region signature. 22 49 IPR017441 GO:0005524
Car02g01021 416 ProSiteProfiles Protein kinase domain profile. 16 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car02g01021 Car20g00057 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g01021 Car-Chr2:7176710 Car08g00214 Car-Chr8:1327638 2.50E-85 dispersed
Car02g01021 Car-Chr2:7176710 Car20g00057 Car-Chr20:317095 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88674 PF00069 Pkinase 8.50E-31 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01021 - K08286 csv:101207338 630.943