Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01028 ATGGCTGATCCCTACTCCATCAATGCCTCTTCTTTTGGTTTATACCATTACTTCTCTTCTTCTTCTTCTTCCCCACCTTCTAATTCTAATCCTTTCTCTCCTTACGATCTCTTCTCGTTCTCTTACTCGAACGATGATAACGATAATAATAATAATACCCTAAAGAACCCGTCTTCCTCTCCTCGAGTTCTCCCGCTTTTAAGTTTAAGTCCCGTGAGACATGATCACCAAGATCACTCATTTTCTCGTAACAACAACAAGAACTTGTGTAGCCCTTGTGAAGAAGACGATGACGAGACGGTTACTGTCGCTTTGCATTTAGGGCTTCCATCGGCTCCGTCTTCGTCTTCTTCCTCTGATCTGATTTTGAGGCTTTCTTCAACTGAGATCTCGGATAAATTAGAAGGTCAATTAGAAGAAGCGGTTCCCGTCGTTGTTCCTAATTATTACTCGGTCTCGTCATCGTCTTCTTCCTCCACAACTGGTGGCGGTGGACTCAACAAGGGTCAGTATTGGATTCCCACTCCAGCTCAGATTCTCATTGGTCCAACTCAGTTTTCTTGCCCTCTTTGCTTCAAAACCTTCAACAGATACAACAACATGCAGGCATTACAGATGCATATGTGGGGGCATGGATCACAATACAGAAAAGGGCCACAGTCACTAAGAGGAACACAGCCAACAGCCATGCTAAGGCTCCCATGTTATTGCTGTGCACCAGGGTGCAGAAACAACATAGACCATCCGAGGTCGAAGCCACTAAAAGACTTTCGAACCCTACAAACGCATTACAAACGAAAGCATGGAATCAAGCCATTTACTTGTAGGAAATGTGGGAAAGCGTTTGCTGTTAGAGGGGATTGGAGAACCCATGAGAAGAACTGTGGGAAGCTTTGGCATTGCACTTGTGGGTCTGATTTTAAGCACAAGAGGTCTTTGAAAGATCACATCAAAGCCTTTGGACATGGACATGCAGCTTATGGGATTGACTCTTTTGACGAAGATGATGAGCCTGCTTCCGAGATCGAACACGATAACGACTTGTCTCACAGCAATGGAGATTGA 1065 44.6 MADPYSINASSFGLYHYFSSSSSSPPSNSNPFSPYDLFSFSYSNDDNDNNNNTLKNPSSSPRVLPLLSLSPVRHDHQDHSFSRNNNKNLCSPCEEDDDETVTVALHLGLPSAPSSSSSSDLILRLSSTEISDKLEGQLEEAVPVVVPNYYSVSSSSSSSTTGGGGLNKGQYWIPTPAQILIGPTQFSCPLCFKTFNRYNNMQALQMHMWGHGSQYRKGPQSLRGTQPTAMLRLPCYCCAPGCRNNIDHPRSKPLKDFRTLQTHYKRKHGIKPFTCRKCGKAFAVRGDWRTHEKNCGKLWHCTCGSDFKHKRSLKDHIKAFGHGHAAYGIDSFDEDDEPASEIEHDNDLSHSNGD 354
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 7194320 7196610 - Carg02721-RA Car02g01028 143514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01028 354 MobiDBLite consensus disorder prediction 334 354 - -
Car02g01028 354 ProSiteProfiles Zinc finger C2H2 type domain profile. 273 300 IPR013087 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car02g01028 Car20g00061 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g01028 Car-Chr2:7194320 Car03g00088 Car-Chr3:1119536 5.19E-127 dispersed
Car17g00906 Car-Chr17:7471048 Car02g01028 Car-Chr2:7194320 1.34E-113 wgd
Car02g01028 Car-Chr2:7194320 Car20g00061 Car-Chr20:336849 4.47E-176 wgd
Car02g01028 Car-Chr2:7194320 Car08g00444 Car-Chr8:2896094 8.89E-112 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3023 None None None None Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01028 - - bhj:120089206 463.766