Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01078 ATGGCGGCTCGAGCTGTTGCTCCGCAGCAACCACTACGAATCAGAGGTGAAGGTAAGCCGAAGATGGTAGAGGCTGAAGGAAGAACAAGGCGAGTTCTTCAAGATATAGGGAATCTGGTGCCTGATCGAGCCGTGGAAGGGAAACTCGGCCCTCAACCTGCCGAGAAGAACAAGAAAGCAATCACCCAAAAGCTGGGTGGAGGAGTAGGAAAGGGAGGCGATGTGGCGGCGAAGGCTACAGTAGTTGAGAAATGCAAAGCTGAGAAACCTAAGACTGTACTCAGCTCCGTCGACAGGCGACATATAATCAACATCAGCGATAGTAAATCAAGGGATAAGAATAAGAGATCTCTGACTTCAACTCTTAGTGCCAGAAGCAAGGCTGCCTGTGGGCTCAATAATCCACTGGATTCAGTAGCTAATATTGATGAAGCAGATGCTAACAATGAATTGGCAGTTGTTGAATACATCGATGATATGTACAAGTTCTACAAGCTTGCAGAAGATGAAAACATAGTGACAGATTACATGGGAACACAGCCAGATTTGAATGCCAAGATGAGGTCCATCCTCATAGATTGGTTGATTGAAGTTCATCGCAAGTTTGAACTAATGCCAGAAACCCTCTACCTCACAGTCAACATTGTAGACCGATTCCTTTCCTTGAAGACTGTGCCAAGGAGAGAGCTTCAACTAGTAGGAGTCAGCTCTATGCTGATAGCATGCAAATATGAAGAGATTTGGGCCCCAGAGGTCAATGATTTTGTGAGTATATCTGCAAATACTTACCAGAGAGAACAGATTTTGGTGATGGAGAAAGTAATCTTGGGGAAGTTGGAATGGCTTCTAACAGTTCCTACACCCTATGTTTTTCTTGTTCGATACGTCAAGGCTTCTGAGCCGTCCGATAAGGAGATGGAGAACATGGTGTTTTTTCTAGCTGAGCTTGGTCTGATGAACTACCCCATAGCCATATCATACAGCCCATCAATGATTGCTTCAGCAGCTGTTTATGCTGCACGATGCACACTGGATAAGAGCCATCTCTGGACAACAACATTGCAGCACCATACAGGCTATGTTGAAGATGAGTTGAAGGAATGTGCAAAGCTCCTTGTGAACTTGCACCGTGGAGCTGCAGATAGCAAGCTGAAGGCTGTGTATAGGAAATATACGAGCCCAGATCGTAGTGCAGTTGCTCTGTTTCCTCCGGCTAGAAGTGTCAGCCCAGATCGCAGTGTAGAAGTATGA 1251 45.8 MAARAVAPQQPLRIRGEGKPKMVEAEGRTRRVLQDIGNLVPDRAVEGKLGPQPAEKNKKAITQKLGGGVGKGGDVAAKATVVEKCKAEKPKTVLSSVDRRHIINISDSKSRDKNKRSLTSTLSARSKAACGLNNPLDSVANIDEADANNELAVVEYIDDMYKFYKLAEDENIVTDYMGTQPDLNAKMRSILIDWLIEVHRKFELMPETLYLTVNIVDRFLSLKTVPRRELQLVGVSSMLIACKYEEIWAPEVNDFVSISANTYQREQILVMEKVILGKLEWLLTVPTPYVFLVRYVKASEPSDKEMENMVFFLAELGLMNYPIAISYSPSMIASAAVYAARCTLDKSHLWTTTLQHHTGYVEDELKECAKLLVNLHRGAADSKLKAVYRKYTSPDRSAVALFPPARSVSPDRSVEV 416
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 7486804 7489327 - Carg02671-RA Car02g01078 143564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01078 416 MobiDBLite consensus disorder prediction 1 22 - -
Car02g01078 416 ProSitePatterns Cyclins signature. 188 219 IPR006671 -
Car02g01078 416 Pfam Cyclin, N-terminal domain 159 283 IPR006671 -
Car02g01078 416 Pfam Cyclin, C-terminal domain 286 404 IPR004367 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g01078 Car-Chr2:7486804 Car19g00883 Car-Chr19:9117124 3.56E-82 dispersed
Car09g00048 Car-Chr9:245604 Car02g01078 Car-Chr2:7486804 8.33E-25 dispersed
Car02g01078 Car-Chr2:7486804 Car01g01581 Car-Chr1:13104446 5.04E-89 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01078 K21777 - csv:101222873 658.292