Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01086 ATGTCACTGGACATGATGGCATCAGAACGTGTTTGTTATGTTCACTGCAACTTCTGCAACACCATTTTAGCGGTAAGTGTTCCATGCAACAGCATGTTCACACTCGTAACTGTGAGATGTGGCCATTGCACAAATCTACTCTCCGTAAACATGGGAGCTTCCCTTCAAGTACTCCCTCCTCAAGAGGGTCATAAGCAGCCGCAACTAACGAGCCCCGAGGATTCAAGCAAGGACAGAGGCTCATCTTCTTCAAAATGCAGCAAAATTGGGTCACTTGAATCTGCTGAACGTGACCAACATAGAATCCCTCCAATTCGCCCACCGGAGAAAAGACAGCGAATTCCTTCTGCATACAACAGGTTCATCAAAGTGGAAATCCAAAGGATTAAGGCTAACAATCCTGACATAAGCCACAGAGAAGCCTTTAGCACAGCAGCTAAAAATTGGGCACATTTGCCTCACATCCACTTAGGGCAGAAGCTGGATGGAAATAATAAGCAAAGTAATTAA 510 45.1 MSLDMMASERVCYVHCNFCNTILAVSVPCNSMFTLVTVRCGHCTNLLSVNMGASLQVLPPQEGHKQPQLTSPEDSSKDRGSSSSKCSKIGSLESAERDQHRIPPIRPPEKRQRIPSAYNRFIKVEIQRIKANNPDISHREAFSTAAKNWAHLPHIHLGQKLDGNNKQSN 169
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 7536427 7540415 + Carg02663-RA Car02g01086 143572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01086 169 MobiDBLite consensus disorder prediction 59 114 - -
Car02g01086 169 MobiDBLite consensus disorder prediction 91 108 - -
Car02g01086 169 MobiDBLite consensus disorder prediction 59 90 - -
Car02g01086 169 Pfam YABBY protein 7 158 IPR006780 GO:0007275
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g01086 Car-Chr2:7536427 Car05g01205 Car-Chr5:11394486 1.70E-60 dispersed
Car06g00681 Car-Chr6:4056093 Car02g01086 Car-Chr2:7536427 8.41E-19 dispersed
Car02g01086 Car-Chr2:7536427 Car20g00118 Car-Chr20:663723 2.36E-38 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3029 PF04690 YABBY 1.30E-69 CL0114 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01086 K25796 - csv:101222154 273.092