Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01097 TACCTTCTTCAAATTCTTCTTCAATTTCCATCGATTTCCCCCAATTCGCAACATCAAGGAGCTCACTCGATCTTTGCTTCTCCGTCTCTTCAACGCTGCTCCATGTCCGGTTCTCCAGCTCCCAACTCCTCTGGCCACCCGCCGGAGCAGATCATGCTCTCTCTTAAACGCCACCTCCCTTTCTCTTCTATCAAACCACCGTTTGCATCTCCTGGGGACTATCACCGCTTTGCCCTCGACTCTCCACTCGCCGATCAACAACTTGACTCTATCGTAGTCAAATCTCCGCAATTGAAGCGGAAGAGTGAGGCAGCAGATTATGAAGCTGAGTCAACTGATAGAGCAGCTGGTCCTAAATTTACTGAAGTAGTTAACAGTTCCCATCAAACACCTGTATCAGTAAAAGGAGGAAAGGGAAACAAATCAAGGCTAACCAAATGCAGTAGATCAGGGCCACAGACTCCCATGTCAAATGTTGGTTCACCTTATGCAAACAATCTTACTCCAGTTGGTCCATGCCGTTATGATAGTTCTCTTGGTCTCTTGACAAAGAAGTTTATTAATCTGATCAAACAAGCGGAAGATGGTATTCTTGATCTAAATAAAGCAGCCGACACGTTGGAGGTACAAAAAAGACGAATATATGATATAACAAATGTCCTTGAAGGAATTGGTCTCATAGAAAAGAAGCTTAAGAACAGAATTCAGTGGAAGGGGCTTGACGTCTCAAGATCAGGGGATGTTGATGACAACTATGCTGGTCTACAGGCGGAAGTAGAGAACCTTTCCATGGAGGAGAATGGATTAGATGAACAAATAAGAGAGATGCAGGAAAGATTAAGAGACCTCAGTGAAGAGGAGAACAACCAAAGGTGGTTATTTGTAACCGAGGAAGACATCAAGGAGTTGCCGTGTTTCCAGAATGAAACTCTTATAGCTATTAAAGCTCCCCATGGAACCACTTTAGAAGTTCCAGATCCTGATGAGGCTGTTGACTACCCCCAAAGGAGGTATAGGATAGTCCTCAGAAGCACCATGGGCCCCATTGATGTTTACCTTGTCAGTCAGTTTGAAGAGAAGTTTGAGGAGATAAATGGTGTGGAAGCGTCCCCAAGCTTGCCGTCAAGCTCTGGGTTTAATGAAACACCTGCAGCAACGCTAGTAACGGATGATACCAGGGGAAAGGAAATTGAAACACGGGAGCAAGATGTAAATAGAATGTGCTCTGATCTAAATGCTTCGCAGGACTTCGTGGGTGGAATTATGAAAATTGTTCCCTCGGCGGTAGATAGTGATGCCGATTACTGGCTCTTGTCTGATGCTGATGTCAGCATCACTGACATGTGGAGAACTGAACCTGGCGTTGAGTGGAATGAACTGAGTACATTTCATGAAGATTACAGTATTGACAACGTCAGCACACCCCAAACCCAGAATCCACCGTCCAATAATTCACCTGATGCGCCTTCTGCTAATCCTTCTAGCAGTTAA 1491 44.94 YLLQILLQFPSISPNSQHQGAHSIFASPSLQRCSMSGSPAPNSSGHPPEQIMLSLKRHLPFSSIKPPFASPGDYHRFALDSPLADQQLDSIVVKSPQLKRKSEAADYEAESTDRAAGPKFTEVVNSSHQTPVSVKGGKGNKSRLTKCSRSGPQTPMSNVGSPYANNLTPVGPCRYDSSLGLLTKKFINLIKQAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKGLDVSRSGDVDDNYAGLQAEVENLSMEENGLDEQIREMQERLRDLSEEENNQRWLFVTEEDIKELPCFQNETLIAIKAPHGTTLEVPDPDEAVDYPQRRYRIVLRSTMGPIDVYLVSQFEEKFEEINGVEASPSLPSSSGFNETPAATLVTDDTRGKEIETREQDVNRMCSDLNASQDFVGGIMKIVPSAVDSDADYWLLSDADVSITDMWRTEPGVEWNELSTFHEDYSIDNVSTPQTQNPPSNNSPDAPSANPSSS 496
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 7609956 7617422 + Carg02652-RA Car02g01097 143583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01097 496 MobiDBLite consensus disorder prediction 143 163 - -
Car02g01097 496 MobiDBLite consensus disorder prediction 369 387 - -
Car02g01097 496 Coils Coil 190 210 - -
Car02g01097 496 Coils Coil 252 293 - -
Car02g01097 496 MobiDBLite consensus disorder prediction 468 496 - -
Car02g01097 496 MobiDBLite consensus disorder prediction 368 395 - -
Car02g01097 496 MobiDBLite consensus disorder prediction 125 163 - -
Car02g01097 496 Pfam E2F/DP family winged-helix DNA-binding domain 176 239 IPR003316 GO:0005667|GO:0006355
Car02g01097 496 Pfam E2F transcription factor CC-MB domain 255 355 IPR032198 GO:0046983
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car02g01097 Car20g00133 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g01097 Car-Chr2:7609956 Car05g00249 Car-Chr5:1391206 8.23E-75 dispersed
Car02g01097 Car-Chr2:7609956 Car20g00133 Car-Chr20:743144 6.01E-164 wgd
Car02g01097 Car-Chr2:7609956 Car03g01015 Car-Chr3:8427955 4.51E-162 wgd
Car02g01097 Car-Chr2:7609956 Car07g00815 Car-Chr7:4316011 2.63E-144 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3030 PF16421 E2F_CC-MB 2.20E-35 No_clan Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01097 K06620 - csv:101219318 788.875