Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01113 ATGGCGGAAGAACATAGATGCCAAGCGCCGAAGCTTTGCGTTAACAACTGCGGATTCTTCGGGAGTCCTGCGACGCAAGATCTCTGCTCAAAGTGCTACCGAGATCTGCAGTTGAAGGAACAGCAATCCTCCTCCGCCAAACTCGCCTTAAACCAAACCCTAACATCCGCCGCCGCCGCCACCATCGCGTCATCCTCCTTTGCGGACGCGTCGTTGTTAAATCTCAAATCGGATTCATTGGAAGCGAACCAGTCCTTTGAGGAGAAGGCGCAGGCGGCGGCAGATGTAACTCCGGCGCCGGCGCAGCAGCAGGCGAGCCGATGCACGACGTGCAGGCGGCGCGTAGGATTGACAGGGTTCAAGTGTAGGTGTGGGATGGTGTACTGTGGGACTCATCGGTACCCGGAGCAACACGGGTGTGAATTTGACTTCAAAGGGATGGGGAAGGATCAGATCGCGAAGGCAAATCCGGTGGTGAAAGGGGAGAAACTACAGAGGATCTGA 504 56.15 MAEEHRCQAPKLCVNNCGFFGSPATQDLCSKCYRDLQLKEQQSSSAKLALNQTLTSAAAATIASSSFADASLLNLKSDSLEANQSFEEKAQAAADVTPAPAQQQASRCTTCRRRVGLTGFKCRCGMVYCGTHRYPEQHGCEFDFKGMGKDQIAKANPVVKGEKLQRI 167
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 7676480 7676983 + Carg02635-RA Car02g01113 143599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01113 167 Pfam AN1-like Zinc finger 108 144 IPR000058 GO:0008270
Car02g01113 167 Pfam A20-like zinc finger 12 34 IPR002653 GO:0003677|GO:0008270
Car02g01113 167 ProSiteProfiles Zinc finger AN1-type profile. 102 148 IPR000058 GO:0008270
Car02g01113 167 ProSiteProfiles Zinc finger A20-type profile. 7 41 IPR002653 GO:0003677|GO:0008270
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g01113 Car-Chr2:7676480 Car07g00846 Car-Chr7:4478844 7.08E-57 dispersed
Car02g01113 Car-Chr2:7676480 Car20g00144 Car-Chr20:794304 8.29E-102 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01113 - - csv:101219115 234.572