Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01124 ATGGAGTCTTCTCACGACGATATCGCCGACGACCTACAAAGCTTGAGCTTCAACTCCACCAACACTAATCGCAGCACTAGCTCCGGCTCCGAGACTACTCTCACCGCCTCCTCCTCCTCCTTCGTTCATATCCCTTCCATTTTCAACAAGCCTCACGCGCCGTCCTCCGACCCTTGCTGGTCAGCTGTTAGCCGGATCCGATCCGAATCGTCTACTCGTCAACTCGCCTTCTCCGACCTTAAGTTCTCGCACCGTCTTGGCTCTGGCGACATTGGCTCCGTCTACCTCGCTGGACTCAAGTCCGCTGGAGATGACGGATGTCTCTTTGCGGCGAAGGTGATGGATAAGAAGGAATTGGCGAGTCGAAGTAAAGAAGGCAGAGCGAGGACTGAGAGGGAGATTTTGGAGTGTTTGGACCATCCGTTTCTTCCAAAGCTCTATGCTAGTATCGACTCGCCGAAATGGCTCTGTCTCTTGACTGAGTTCTGCCACGGCGGCGACCTCCATGTTCTCCGGCAACGGCAGCCTAACAAACGCTTCGGTGAACTCGCCGTGAGTATGATGGTCAGAGGTGGGGACCAGCAGGTTGGTTATTGTCGCTTGAGGGATTTGTGGAGAATAGAACGCTACTGTGGGCCTGCTCGCACTGGATTATCTGAGCTCGTTGCTATTGGATGGGCCAAGGAGATGAGACATATATACAGGCAACCCAATGAAAAGGAGGGAAATAATAGTATTGATATAGCTATGAGATTCTATGCATCAGAGATAGTAGTTGCTATTGAGTACCTTCACATGATGGGGATTGTTTACCGTGATTTGAAGCCGGAAAATGTGCTGGTACGATCGGACGGCCATATCATGCTCACTGATTTTGATCTCTCCTTAAAGTGTGAGGATTCAACAGCGACCCCACAGGTTATCACTGCCAAAAATGCAACAAATGGCACCGCCCGGCCAAAGAACTGCCAAATTGAGGCCCCTCCTTTCACATCATCCTCCTGCATACTTCCAAACTGCATAGTCCCGGCGATGTCGTGTTTCAACCCGAAACGCAAGCGCAAGAAGAAGTCTAGCCACAGCAATGGACCTGAGTTTGTTGCTGAGCCGGTCGACGTCCGGTCCATGTCGTTTGTTGGCACCCACGAGTATTTGGCGCCAGAGATTGTCTCTGGTGAGGGCCATGGAAGTGCAGTGGATTGGTGGACTTTAGGGGTGTTTGTGTTTGAGTTGTTTTATGGAGTGACACCCTTTAGAGGCATGGACAATGAACTCACCTTGGCCAACATAGTGGCCAGAGCCCTTGAGTTTCCTAAAGAACCAGTGGTGCCGACGGCGGCGAAGGACCTCATATCGCAATTACTGGTCAAAGATCCGGCAAGGCGGCTGGGGTCAACAACAGGGTCGTCGGCGATCAAGCACCACTCATTTTTCCAAGGGGTAAATTGGGCATTACTGAGATGTACGTCGCCACCATTCATTCCTCCACCATTTAGTAGAGAAACTGCAACGGATGAAAGCTGCCCAGAGGCCCCAGTGGACTATTATTAG 1551 51.39 MESSHDDIADDLQSLSFNSTNTNRSTSSGSETTLTASSSSFVHIPSIFNKPHAPSSDPCWSAVSRIRSESSTRQLAFSDLKFSHRLGSGDIGSVYLAGLKSAGDDGCLFAAKVMDKKELASRSKEGRARTEREILECLDHPFLPKLYASIDSPKWLCLLTEFCHGGDLHVLRQRQPNKRFGELAVSMMVRGGDQQVGYCRLRDLWRIERYCGPARTGLSELVAIGWAKEMRHIYRQPNEKEGNNSIDIAMRFYASEIVVAIEYLHMMGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCEDSTATPQVITAKNATNGTARPKNCQIEAPPFTSSSCILPNCIVPAMSCFNPKRKRKKKSSHSNGPEFVAEPVDVRSMSFVGTHEYLAPEIVSGEGHGSAVDWWTLGVFVFELFYGVTPFRGMDNELTLANIVARALEFPKEPVVPTAAKDLISQLLVKDPARRLGSTTGSSAIKHHSFFQGVNWALLRCTSPPFIPPPFSRETATDESCPEAPVDYY 516
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 7744738 7749044 - Carg02624-RA Car02g01124 143610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01124 516 MobiDBLite consensus disorder prediction 1 32 - -
Car02g01124 516 MobiDBLite consensus disorder prediction 10 32 - -
Car02g01124 516 Pfam Protein tyrosine and serine/threonine kinase 80 301 IPR001245 GO:0004672|GO:0006468
Car02g01124 516 ProSiteProfiles Protein kinase domain profile. 80 478 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g01124 516 ProSitePatterns Serine/Threonine protein kinases active-site signature. 269 281 IPR008271 GO:0004672|GO:0006468
Car02g01124 516 Pfam Protein kinase domain 375 478 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car02g01124 Car20g00153 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g01124 Car-Chr2:7744738 Car07g00867 Car-Chr7:4623377 1.31E-113 dispersed
Car02g01124 Car-Chr2:7744738 Car20g00153 Car-Chr20:860798 0 wgd
Car02g01124 Car-Chr2:7744738 Car03g01056 Car-Chr3:8614273 1.01E-111 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88679 PF07714 PK_Tyr_Ser-Thr 2.80E-18 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01124 K08286 - csv:101207262 494.197