Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car02g01125 | ATGCCGGTTTTGGCGGTGGGAAAAGAGAAGAGAGTTTACAGTCATGGAGTCGAGTCGGAGGCTCTCGTCTATGGCTCATGTTGGCGTTGGCTATGGCTTTGGCGTGCTCTCTCGGATTCCTTCTCTGTTGTTTCCGTTTTCGTATTCCTCTGTTCGGTGTCTCGGAGACGTCGGTTTCGGAGGCTTGGATCATCCCCGACGTTACGGTGGGTGGAGTGGGTTGCTCTCGTTGCTTCGTTTCGCTGGAAATTTATGTGTTATTCCCAAAAGATGACTACATTAGCTAGTACTTCTAAAATTGTTGAATCAACGGAAGAATTTGATTCTGAGAAAGCTGGGACAAGTTACACGATAGATGTAGGAAAAAGGTTTTCAATAGAGGATGACATTAATCGTCTGTTTCAGGCAATTGATATCAGAACATTACGTAACAGGTCAGGTCAGCAACATGGAGTTGACAAAGATGCGTTGCAAAAGAGTGCGATGAAGAGACCAATGAGAGTGGGTTCATCTCACATGGCAGGGATTGGAATTTCTGAGCCTGCAAGCTTAAAGCAGGCTTTGAGGGGCTTATGCATATCTCAGGCTGCTGAAATGGCTGCTGCAAAGAGGTTAACAAGGTCTTTAGGTTCACCTGGAATCTCTGAAGCAGGAACTATTAAAAGGTTGTATAAGGCTGTGGTGGTTGAGGCCAATGGATCTGATGTGCGAATAAATGAAAGCAAAGAAAATTTGGTAGAAATTTCCATTGTTTCAGAAATTATGTCTACTTTTCAGAATAAGATGCCTGAATTGTTGCATAAAACTGAGGCAGATATATCAAACCAGGGTGCTGAGTCTTCACTTTTTAAGAACACTGGGGTATCAGAAGAGGCAAATGTGGATAGATTGATGTCAAAGGATCTTGTAGAAGTGACAAGTATAAAGCCACTTAAATCTCCTTCCTTCACTCCTTCTGGTGAGAAGGATTCGACTCTGAACAGCTTGGATAATTCCTCAACTGAAGATTTGGCAAAAAATTCAGTGCCAGAGGAGAAAGGTACAATGCGTTGTTTATCCTCTCTATCAAGCTCTGGATCTGTTATTTGGCCGAACAAATCAGCTTTCAATAATACACGTTTCATCAAACCTATTTTCAGGACCAAAAACTCTGTCAAGAAGAAAGCAAAACTTGAACCTATTTCCTCCCCTAGCGTGTTTGAAATGCGTACAGTGATGGTTGACACTGATTTGGGTTCCATAGCAGAAAAGTTTGAGAACCGAATGCCAGAAAATGCCCAGAATCATGAGAGTAAAGAAAAAGAGATAGGTTCCTCTATCTCTAGTAGCACAACTTTAGGTATTGAAGTAAGTGCAAATCTAGTAAACACAGAGTCCAGTGGACCTGGTACATCTCTCAACTGCTGTAACAGGATCAGACCAACTATTATGTCATTCGATGAGAGATCCAGATCAAGAGAGAAAGGGATGTTCTCTCAGAGCTCTAAAAGTAGTAGTATTGGTGAATGTAGCCATAGCCCAAGCATCAGTGGGGAAAGCATTCTCAGTGGATCAAGTTGTAGTGGAGTAAGGCCTCACATGTCAAGGGACTTGAAATGGGAAGCTATCCACCACATTCAGGATCAACATAAATGCCTAAGTCTGAAAAACTTCAATCTGTTGAGGAGACTTGGTCTTGGGGACATTGGGACTGTATATCTCTCTGAGCTATGCGATTCCAGCTGTCTATTTGCTATCAAAGTGATGGACAAGGAGTTCTTGGCAAGCAGAAAAAAAATACTTCGGGCACAAACTGAGAGAGAGATACTGGAAATACTTGACCATCCATTTCTCCCTACACTATATGCTCATTTTGAGACGGATGAGCAATCATGCTTGGTCATGGACTACTGTTCTGGTGGAGATCTCCATGTGCTGCAACAAAAGCAACCATGCAAGAGTTTCTCTGAGCATGCAGTCAGGTTCTATGTTGCCGAGATTCTTCTTGCCCTGGAGTACTTACACATGCAAGGCGTTATTTACCGAGACCTGAAACCCGAAAATGTTCTGGTCCGAGAAGATGGGCACATAATGCTCACAGATTTTGATTTCTCTCTTAGATGTGCTGTTAATCCAATGCTGCTTCAATCATCATCTCCAGTTGTGGAATCCACCAAGAGGAAGTTGAATCCCTGTGATGAATCTAGTTGCATTGACCCTTTCTGCCTCCACCCATCCTGGCAGGTCTCATGCTTCACCCCCAAAGTTTTATCTGCTCCATACAAATCTCGGAGAACAAAAGCAGACAATCAGGCTAGTCTATTACCACAGCTTATTGTCGAGCCAACTGGTGTGCGGTCCAATTCATTCGTAGGAACCCACGAATACCTCGCTCCTGAGATTGTTAAGGGTGATGGCCATGGGAGTGCTGTTGATTGGTGGACTTACGGGATTTTCCTGTTTGAGCTACTATATGGTAAGACTCCCTTCAAAGGTTCAGGAAATGAGGACACATTAGCGAACATAGTATCCCACACTCTCAAGTTCCCTGATAGCCCCATAGTTAGCTTTCATGCAAGAGATCTAATCAGATGTCTGTTGGCAAAGGAGCCTGAAAACCGATTAGGCGCAACAAAAGGAGCTATTGAGATTAAGCAGCATCCATTTTTTGAAGGCATCAATTGGGCTCTGATACGTTGTGCAGTTGCACCTGAGCTTCCCAAGTTCTTCGACGATGGAACTGGTGCAATGCCAGTGGATCCCGGGGAGAACACAAAGTGTAGAGATCTCGAGAATATGGAAGCGGATGCAGCAATCTTCTACCTGTTTTAG | 2811 | 43.65 | MPVLAVGKEKRVYSHGVESEALVYGSCWRWLWLWRALSDSFSVVSVFVFLCSVSRRRRFRRLGSSPTLRWVEWVALVASFRWKFMCYSQKMTTLASTSKIVESTEEFDSEKAGTSYTIDVGKRFSIEDDINRLFQAIDIRTLRNRSGQQHGVDKDALQKSAMKRPMRVGSSHMAGIGISEPASLKQALRGLCISQAAEMAAAKRLTRSLGSPGISEAGTIKRLYKAVVVEANGSDVRINESKENLVEISIVSEIMSTFQNKMPELLHKTEADISNQGAESSLFKNTGVSEEANVDRLMSKDLVEVTSIKPLKSPSFTPSGEKDSTLNSLDNSSTEDLAKNSVPEEKGTMRCLSSLSSSGSVIWPNKSAFNNTRFIKPIFRTKNSVKKKAKLEPISSPSVFEMRTVMVDTDLGSIAEKFENRMPENAQNHESKEKEIGSSISSSTTLGIEVSANLVNTESSGPGTSLNCCNRIRPTIMSFDERSRSREKGMFSQSSKSSSIGECSHSPSISGESILSGSSCSGVRPHMSRDLKWEAIHHIQDQHKCLSLKNFNLLRRLGLGDIGTVYLSELCDSSCLFAIKVMDKEFLASRKKILRAQTEREILEILDHPFLPTLYAHFETDEQSCLVMDYCSGGDLHVLQQKQPCKSFSEHAVRFYVAEILLALEYLHMQGVIYRDLKPENVLVREDGHIMLTDFDFSLRCAVNPMLLQSSSPVVESTKRKLNPCDESSCIDPFCLHPSWQVSCFTPKVLSAPYKSRRTKADNQASLLPQLIVEPTGVRSNSFVGTHEYLAPEIVKGDGHGSAVDWWTYGIFLFELLYGKTPFKGSGNEDTLANIVSHTLKFPDSPIVSFHARDLIRCLLAKEPENRLGATKGAIEIKQHPFFEGINWALIRCAVAPELPKFFDDGTGAMPVDPGENTKCRDLENMEADAAIFYLF | 936 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 7751331 | 7755435 | + | Carg02623-RA | Car02g01125 | 143611 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car02g01125 | 936 | MobiDBLite | consensus disorder prediction | 313 | 338 | - | - | |
Car02g01125 | 936 | MobiDBLite | consensus disorder prediction | 313 | 346 | - | - | |
Car02g01125 | 936 | Pfam | Protein kinase domain | 780 | 883 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Car02g01125 | 936 | Pfam | Protein kinase domain | 552 | 700 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Car02g01125 | 936 | MobiDBLite | consensus disorder prediction | 482 | 521 | - | - | |
Car02g01125 | 936 | MobiDBLite | consensus disorder prediction | 490 | 521 | - | - | |
Car02g01125 | 936 | ProSiteProfiles | Protein kinase domain profile. | 551 | 883 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Car02g01125 | 936 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 672 | 684 | IPR008271 | GO:0004672|GO:0006468 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Car02g01125 | Car20g00154 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car02g01125 | Car-Chr2:7751331 | Car07g00867 | Car-Chr7:4623377 | 0 | dispersed | |
Car02g01125 | Car-Chr2:7751331 | Car20g00154 | Car-Chr20:868294 | 0 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
88680 | PF00069 | Pkinase | 1.50E-35 | CL0016 | Car | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car02g01125 | - | - | cpep:111777395 | 1350.5 |