Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01152 ATGGGTCAGATTCAGTACTCTGAGAAGTACTTCGATGATACTTACGAGTATAGGCATGTGGTGCTCCCACCCGATGTGGCAAAGTTGCTTCCGAAGAATCGCCTTCTCTCGGAAAATGAGTGGCGTGCAATTGGAGTTCAGCAGAGTCGTGGGTGGGTGCACTATGCTATTCATCGACCTGAGCCGCATATCATGCTATTCCGGAGGCCCCTGAACTACCAACAGCAGCAGGAGAACCTCGCTCAACAGAACGTGCTTGCTGCTAAATGA 270 50.74 MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENLAQQNVLAAK 89
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 7913276 7914556 + Carg02596-RA Car02g01152 143638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01152 89 PRINTS Cyclin-dependent kinase regulatory subunit signature 3 17 IPR000789 GO:0016538
Car02g01152 89 PRINTS Cyclin-dependent kinase regulatory subunit signature 18 32 IPR000789 GO:0016538
Car02g01152 89 PRINTS Cyclin-dependent kinase regulatory subunit signature 40 54 IPR000789 GO:0016538
Car02g01152 89 PRINTS Cyclin-dependent kinase regulatory subunit signature 55 69 IPR000789 GO:0016538
Car02g01152 89 Pfam Cyclin-dependent kinase regulatory subunit 4 70 IPR000789 GO:0016538
Car02g01152 89 PANTHER CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT 1 86 - -
Car02g01152 89 SUPERFAMILY Cell cycle regulatory proteins 1 83 IPR036858 GO:0016538
Car02g01152 89 Gene3D - 1 83 IPR036858 GO:0016538
Car02g01152 89 PANTHER CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7 1 86 - -
Car02g01152 89 ProSitePatterns Cyclin-dependent kinases regulatory subunits signature 1. 6 24 IPR000789 GO:0016538
Car02g01152 89 SMART CKS_2 3 72 IPR000789 GO:0016538
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car02g01152 Car13g00200 CCT
Car02g01152 Car20g00470 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car13g00200 Car-Chr13:2257626 Car02g01152 Car-Chr2:7913276 4.21E-51 wgd
Car02g01152 Car-Chr2:7913276 Car20g00470 Car-Chr20:2605637 1.01E-57 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01152 K02219 - egr:104421234 172.555