Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01179 ATGGATTTCGACTCTGTTTTTGACCTCCCTGTTAAGTTCACCGAGCATCGTAACCATGTTAAGCTCTCTTCAATGCCGGAAATTACGCCGAGAGTTGTACGAATTTCCTTCACCGACGGTGACGCCACCGATTCCTCCAGTGATGATGAGAACGAAATGTTTGGTCGCCGCAGAGTGAAGAAGTTTGTGAATGAGATTACGATTGAGCCGTCTTGTTCTGGAGAAGGAAATGGAATCTGGGGTGTGAACAGATCGGCGAGAAATGGCCGGAGACGGTCGTCCGGGAAATGTGGGGTCTCGTCCAGGAGTCGTCGGTCGGTGAAGATGCCGGATGGGAAGAAGTTCCGTGGTGTGAGACAAAGACCGTGGGGAAAATGGGCTGCGGAAATCAGAGACCCACTGCGGCGTGTACGGGTGTGGCTGGGAACTTATGACACGGCAGAGGAAGCTGCCATGGTTTACGACAACGCCGCCATTCAACTCCGGGGTCCTGATGCACTGACCAATTTCACCACCCAATCGCCCAAAAAATGCTCCGCCTACGACTCCGGCGAAGAGTCGAACAACAACATTTGCTCTCCAACCTCAGTCCTCAGGTGTCCATCGCCTCCAAACGAAGAGGCCCAATCTCAACTCCCCGGCGAGCCAGACAACTCGTCCGTATCGGAAAATTTCTCATCGGAGTTCTCAGACTTCTCGAGCTACTCCGACACCTTCATTCCGGACGACATTTTCGCCTTCGAATCTTCAATTCCGACCTTATTAGACGACGAGATAGGCCTACATCACCAAACCAACTTCTTCGGCGATGACAGTTTCTTCAACGGCGTGTTTCACAGTCCCATCGAAGAAACCGGGTTCAGGTTCGGGTTCGAGTACCCTACCCCCCCTACAGACGACTTCTTCCAAGACTTCAGCGACGTGTTCGGTTCGGATCCTCTCGTTGCCCTTTAA 954 52.52 MDFDSVFDLPVKFTEHRNHVKLSSMPEITPRVVRISFTDGDATDSSSDDENEMFGRRRVKKFVNEITIEPSCSGEGNGIWGVNRSARNGRRRSSGKCGVSSRSRRSVKMPDGKKFRGVRQRPWGKWAAEIRDPLRRVRVWLGTYDTAEEAAMVYDNAAIQLRGPDALTNFTTQSPKKCSAYDSGEESNNNICSPTSVLRCPSPPNEEAQSQLPGEPDNSSVSENFSSEFSDFSSYSDTFIPDDIFAFESSIPTLLDDEIGLHHQTNFFGDDSFFNGVFHSPIEETGFRFGFEYPTPPTDDFFQDFSDVFGSDPLVAL 317
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 8026348 8027301 - Carg02569-RA Car02g01179 143665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01179 317 Pfam AP2 domain 114 163 IPR001471 GO:0003700|GO:0006355
Car02g01179 317 ProSiteProfiles AP2/ERF domain profile. 114 171 IPR001471 GO:0003700|GO:0006355
Car02g01179 317 MobiDBLite consensus disorder prediction 83 116 - -
Car02g01179 317 MobiDBLite consensus disorder prediction 200 225 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g01179 Car-Chr2:8026348 Car16g00501 Car-Chr16:3193931 7.10E-89 dispersed
Car20g00262 Car-Chr20:1522346 Car02g01179 Car-Chr2:8026348 7.28E-39 dispersed
Car15g01140 Car-Chr15:9003058 Car02g01179 Car-Chr2:8026348 4.04E-171 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3038 PF00847 AP2 3.80E-14 CL0081 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01179 - - csv:101210444 499.204