Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01197 TTTCCAGTAACCCCATTTTGTCTTCTCCCCTCCGATGCTTCCCAAAATATAGCATTCATTTACAAAAACAAACCTCCCCAGTTGCTGCTTCCTTCGAAACCGCTTCTGGGTCTTCTTCCAATTCCAGAAATGGCTACTAAAGACTCGAGTTCTGCGAGTGAGGGCAAGATTAAAGGGGTTCTCACCCATGGCGGCCGATATGTGCAGTATAACGTCTACGGTAACTTGTTTGAGGTTTCGGCTAAGTATGTTCCTCCTTTGCGACCCATTGGTAGAGGCGCTTATGGTCTTGTTTGTGCTGCTGTAAATTCTGAGACACATGAGGAGGTTGCTATCAAGAAAATTGGAAATGCATTTGATAACATAATCGATGCTAAGAGGACATTGAGAGAAATTAAGCTTCTTTGCCACATGGAACATGAAAATATCATCGCCATCAGAGACATCATTCGACCCCCAAAAAGAGAGGTCTTTAATGATGTGTACATTGTTTACGAGTTGATGGATACCGATCTTCATCAAATAATTCGCTCTGACCAATCGCTGACAGATGACCATTGCCAGTACTTTATGTATCAGTTATTGCGCGGGCTGAAATATGTACATTCAGCCAAGGTCCTGCACCGTGATCTGAAGCCAAGCAACCTGCTACTGAATGCAAACTGCGACCTTAAAATTGGAGACTTTGGGTTGGCAAGGACAACGTCTGAAACCGACTTCATGACTGAATATGTGGTCACTCGCTGGTACCGAGCGCCAGAATTGCTGCTCAATTGTTCGGAGTACACTGCCGCCATTGATGTCTGGTCTGTTGGATGCATACTTGGTGAGATCATGACCCGAGAGCCTCTCTTCCCTGGAAAAGATTATGTTCATCAACTAAGACTTATAACTGAGCTACTTGGATCACCAGACGATGCCAGTCTAGGATTTCTTCGAAGCGATAACGCTCGAAGATATGTCAAGCAGCTTCCTCAATACAAGAAACAACAATTCTCAACTAGATTTCCCAACATGTCTCCAGCTGCCTTGGATCTTCTAGAAAAGATGCTCGTGTTTGATCCAAACAAACGCATCACAGTTGAGGAGGCACTCTGTCATCCATACTTGCAATCTCTTCACGACATCAACGACGAGCCAGTGTGTGGCAGACCTTTCAATTTCGATTTCGAGCAACCATCGTGCACTGAAGAGCATATCAAAGAACTGATCTGGAAAGAATGTGTCCGGTTCAATCCTGATGAATCAGCGAGGAGGACGACCCTTTGCGTTTAA 1275 44.71 FPVTPFCLLPSDASQNIAFIYKNKPPQLLLPSKPLLGLLPIPEMATKDSSSASEGKIKGVLTHGGRYVQYNVYGNLFEVSAKYVPPLRPIGRGAYGLVCAAVNSETHEEVAIKKIGNAFDNIIDAKRTLREIKLLCHMEHENIIAIRDIIRPPKREVFNDVYIVYELMDTDLHQIIRSDQSLTDDHCQYFMYQLLRGLKYVHSAKVLHRDLKPSNLLLNANCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDVWSVGCILGEIMTREPLFPGKDYVHQLRLITELLGSPDDASLGFLRSDNARRYVKQLPQYKKQQFSTRFPNMSPAALDLLEKMLVFDPNKRITVEEALCHPYLQSLHDINDEPVCGRPFNFDFEQPSCTEEHIKELIWKECVRFNPDESARRTTLCV 424
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 8146811 8150426 + Carg02551-RA Car02g01197 143683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01197 424 Pfam Protein kinase domain 88 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g01197 424 ProSitePatterns Protein kinases ATP-binding region signature. 90 114 IPR017441 GO:0005524
Car02g01197 424 ProSitePatterns MAP kinase signature. 119 222 IPR003527 GO:0004707|GO:0005524|GO:0006468
Car02g01197 424 ProSitePatterns Serine/Threonine protein kinases active-site signature. 206 218 IPR008271 GO:0004672|GO:0006468
Car02g01197 424 ProSiteProfiles Protein kinase domain profile. 84 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car02g01197 Car15g01126 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g01197 Car-Chr2:8146811 Car08g00773 Car-Chr8:5057199 0 dispersed
Car01g00504 Car-Chr1:2963669 Car02g01197 Car-Chr2:8146811 3.33E-60 wgd
Car15g01126 Car-Chr15:8878926 Car02g01197 Car-Chr2:8146811 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88684 PF00069 Pkinase 1.40E-71 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01197 - - csv:101214254 760.755