Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01203 ATGGGCTTCCCTGCAAGCTACACTGAGCTGCTTCTCCCGAAGCTCTTCATCCATGTACTCTCCTTACTCGGCTTCCTCAGGAAGCTCATCTCCCTCTTATTTTGCCTTCTAGGGCTCCAGGATTTTCTTGAACCGGACATTCCTTGGTCTAATCATTCTGATTCTTTTCCGACGGGACCATTGACGGACCTCGATCCTCTTTCCGCTGCTGTTCTCCGTGAGATTCTTCCTGTCGTCAGATTCTCTGAACTTCTGGATCCGCCGGAGAGCTGCGCTGTTTGTCTCTACGAGTTCGAGACCGACGATGAGATCCGCCGCCTCGCGAACTGTCGCCACATCTTCCACCGCGGATGCCTCGATCGGTGGATCGGTTATGGTCAGAGGACCTGCCCGCTGTGCCGGACGGTGTTCATTCCGCCCGATTTGCGGACTGGTGGTTGTAATTTTGACGATAGGCCTTGGGAGGATTCGGAACTCTTCGAAGCACTCCACACTGATTCTTCTTCATCCTCGACGCTTCTCAGCGCTGGTTTGTAG 537 53.82 MGFPASYTELLLPKLFIHVLSLLGFLRKLISLLFCLLGLQDFLEPDIPWSNHSDSFPTGPLTDLDPLSAAVLREILPVVRFSELLDPPESCAVCLYEFETDDEIRRLANCRHIFHRGCLDRWIGYGQRTCPLCRTVFIPPDLRTGGCNFDDRPWEDSELFEALHTDSSSSSTLLSAGL 178
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 8170627 8171163 + Carg02545-RA Car02g01203 143689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01203 178 ProSiteProfiles Zinc finger RING-type profile. 91 134 IPR001841 -
Car02g01203 178 Pfam Ring finger domain 90 134 IPR001841 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g01203 Car-Chr2:8170627 Car14g01857 Car-Chr14:14393401 1.11E-38 dispersed
Car15g01120 Car-Chr15:8843502 Car02g01203 Car-Chr2:8170627 6.38E-110 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01203 K16281 - csv:101215533 303.908