Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01225 ATGGATGGGAGGGACGGCATGGCATTGTCTGGTGGCTCTGCTTCTTACTACATACATCGGGGAGGAGGGGTTGGAGGCTCTGGATCAGGGCTGCCATCGGCTGGATCACATGCCTCCCCTGTATTCCGGCCAATGGCTAACCAGGGTGTTTTGTCTCACTCAAATCTCAGAGGCAACTCAGTTGGACCAACGTATGCTGTTGAGCCATCTCATTCCAATTACCTTCGTGGGATTAGTATGAATGTCTCACCTGGAGTGAACTCTGGTGAACCTGTAAAGAAAAAGAGGGGGAGGCCAAGGAAATATGCTCCGGATGGGCCGGTCTCATTGGGTCTGTCTCCCATGTCTGCTGGTTCTAAGCTCACTCCAGGGTCGAATTCGTCAACCCCGAAACAACGAAGAGGGCGGCCCCCTGGCTCTGGAAGGAAACAACAATTAGCTCTCCTTGGTGAGTGGATGAACAATTCAGCTGGACTAGCTTTTGCTCCACATGTCATTCACGTTGGAGCTGGAGAAGATATTGTAGATAAAGTATTGTCGTTTGCACAGCAGAGGCCAAGGGCTGTTTGCATCATGTCGGGCAATGGTACCGTTTCTTCTGTTACACTACGCCAGCCTGCATCTACTGGCGTGAGCGTCACATATGAGGGTCATTTCCAGATATTGTGTTTGTCTGGTTCTTACTTGGTGGCTGAAGATGGTGGTCCTCGAAATAGGACGGGCGGTATTAGTGTTTCCCTCTCTAGTCCTGATGGTCATGTCATTGGTGGTGGAGTTGCCGTTCTTACAGCGGCTGGCCCTGTTCAGGTAGTTGCTTGTAGCTTTGTTTATGGTGCAAAGATCAAGAATAAGCAGGTCGCTGGTCTGAGAAGCAATGACGGTTCCGAAAATGATCATCATGATAATTTGGTTTCGCCGTCGAGTGCCCCATCTGCTCAAACATACAATCCTTCTGCAATTGGTGTTTGGCCTGGTTCCCGTTCAGTCGATGTGAGAAACCCTCATACTGGAATCGATTTGACACGAGGATGA 1032 50.0 MDGRDGMALSGGSASYYIHRGGGVGGSGSGLPSAGSHASPVFRPMANQGVLSHSNLRGNSVGPTYAVEPSHSNYLRGISMNVSPGVNSGEPVKKKRGRPRKYAPDGPVSLGLSPMSAGSKLTPGSNSSTPKQRRGRPPGSGRKQQLALLGEWMNNSAGLAFAPHVIHVGAGEDIVDKVLSFAQQRPRAVCIMSGNGTVSSVTLRQPASTGVSVTYEGHFQILCLSGSYLVAEDGGPRNRTGGISVSLSSPDGHVIGGGVAVLTAAGPVQVVACSFVYGAKIKNKQVAGLRSNDGSENDHHDNLVSPSSAPSAQTYNPSAIGVWPGSRSVDVRNPHTGIDLTRG 343
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 8297950 8300956 + Carg02523-RA Car02g01225 143711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01225 343 MobiDBLite consensus disorder prediction 289 343 - -
Car02g01225 343 MobiDBLite consensus disorder prediction 115 134 - -
Car02g01225 343 MobiDBLite consensus disorder prediction 301 321 - -
Car02g01225 343 Pfam Plants and Prokaryotes Conserved (PCC) domain 163 276 IPR005175 -
Car02g01225 343 ProSiteProfiles PPC domain profile profile. 158 295 IPR005175 -
Car02g01225 343 MobiDBLite consensus disorder prediction 76 143 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g01225 Car-Chr2:8297950 Car17g00389 Car-Chr17:2588607 1.83E-88 dispersed
Car02g01141 Car-Chr2:7822569 Car02g01225 Car-Chr2:8297950 5.49E-39 transposed
Car15g01102 Car-Chr15:8671648 Car02g01225 Car-Chr2:8297950 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01225 - - csv:101219973 619.387