Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01227 ATGCTGAAGTTGCCGCGGCGGAAACGCTCGCCGGCGGCAACGAATCAGGAGAACGCGAATGATGTAGCGACTATTGACGATGACGAGACGGCGGCGGGGGCGGGGGCGAGAAAGGCGGCGGAAGTGAAGGTGGTGCTCTGTGTTTCCGGCATGACTTGCTCTGCTTGCGCTGTTTCGGTAGAGAATTCCATCAAACATCTTCCAGGCATTCTCGATGCCGCTATCGATTTCTTGAACGATAGGGCTCAAATCCGCTATCTCCCCAATCTCATCGATGAAGATTCAATAGTTAAAGCAATTGAAAATGCTGGATTTCAAGCTACGATATCGAAGGACAGCGCCGATCATCGATCGAGAGAAGTATGTCGAATCCGAGTAAATGGGATGGGCTGCAATTCTTGCTCTTCCATGGTAGAATCAGTTTTGGAAGAAATGTACGGCGTCCAAAAGACTCACATTGCTCTCTTCAATGGGGAAGCAGAAGTTCACTATGATCCAAAGGTCGTTAACTCCACTCAGTTCATTGTAGCCATACAAGACATTGGCTTTGATGCCTTACTTATAACCATTGGCGAACACATTAGCAAGATTGAGCTCAAGATCGATGGCATGGATAACGAAAACTCATCGACAAAAGTTAAAGAATCGCTCGAATCGGTCGTTGGAATCGAAGATGTCGATATCGACATGGGTTTGACCAAAGTTACCATATCTTACAAGCCTGATATAACAGGACCAAGAACTTTTATTGAAGTGATCGAGTCGATCAAATCCGAGCATTTCAAGGCCACGATATATCCCGCAAATGTGGGTCGAGAAAATCATAAGGAGAAAGAAATTAAACAGCATTATAAGTACTTCTTATGGAGCTCAGCTCTTTCTGTTCCTGTTTTCTTAACATCCATGGTGTTTATGTATATACCTGGAATCAAGCAGATTTTGGATATCAAAGTAGTCAATATGATGAATGTTGGACATCTTATCAAGTGGAATTTGTCCACTCCTGTCCAGTTCATCATAGGTTCAAGATTCTACATTGGATCATACAAAGCATTGCGCCGTGGTTCTGCCAACATGGATGTATTGATCACTTTGGGAACTAATGCAGCTTATTTCTATTCTGTTTATATTGTTCTAAGAGCAGCTACTTCCCCTGCTTTTGATGGGACAGATTTCTTTGAGACTAGCTCCATGCTGATCACTTTCATTCTACTTGGTAAGTATTTGGAGATTCTAGCTAAAGGAAAGACCTCTGAGGCCATTGCTAAGCTTAAGCACTTGGCGCCCGAGACCGCGACGCTCTTGACTCTAGATGGCCATGGAAATGTGATCAGTGAAGTAGAAATCAGTAGTGAGCTGATTCAGAAGAATGATGTTATTAAGATTACGCCTGGTGCGAAAGTAGCTTCCGATGGCATTGTCGTCTGGGGCGAAAGTCATGTCAATGAGAGTATGATTACTGGAGAAGCGAAACCAGTAGCGAAAAGGACAGGCGACAAGGTGATAGGAGGAACTATGAATGAGAATGGGGTGTTGCATATTAAGGCAACACATGTCGGATCAGAGAGTTCTCTAGCGCAAATCGTTCGACTCGTCGAATTGTCTCAGTTGGCGAAAGCTCCTATTCAGAAACTTGCAGACCATATCTCCAAGTATTTTGTGCCTCTGGTAATTTTGCTTTCTTTTCTCACTTGGATTGCCTGGTTTTTAGCTGGAAAGTTGCATTTGTATCCTAAGTCCTGGTTGCCTTCTTCAATGGACAGTTTTGAACTAGCTCTCCAATTTGGGATTTCTGTTATGGTCATAGCTTGCCCTTGTGCTCTTGGCCTTGCCACCCCGACCGCTGTGATGGTCGGGACCGGTGTCGGTGCATCTCAAGGTGTACTAATTAAAGGTGGCCAAGCTTTAGAATTTGCACATAAGGCGAGCTGCATTGTGTTTGATAAGACAGGAACGCTAACAGTTGGAAAGCCAGTGGTTGTAAATGTAAAACTAATGGACACTATAGTACTTGAAGAACTGCTTGAACTCACTGCTGCTACTGAGGTGAACAGTGAGCATCCAATAGCCAAGGCCATTGTTGAATATGCTAAGCAATTCAAGGAAGAACATAACCCCATTTGGCCTGAAGCTCAAGAGTTCATATCCATTCCTGGACATGGAGTGGAAGCCATTGTAAGGAACAAGAAAGTTGTGGTTGGAAACAAGAGCTTGATGATGAACAATGGCATAGAAATTCTTGGGGAAACGGAGAGCTTCCTTGTCGACGCCGAAGGTATGGCGAAAACCGCGGTTTTGGTGGCCGTAGATCGAACGGTGTCGGGAGTTATCGTGGTGTCGGATCCATTGAAACCAGGAGCCAAAGAGGTGATCTCCATTCTCAAATCTATGGAAGTAAAGAGCATAATGGTAACAGGTGACAATTGGGGGACTGCAAATTCCATTGCCAAAGAAGTTGGAATAGAAACGGTCATTGCAGAGGCCAAGCCTCAGCAGAAAGCAGAGGAAGTGAAGAATCTTCAGACGGCCGGGCACACGGTGGCAATGGTGGGAGACGGGATCAATGACTCGCCCGCCCTTGTAGCAGCCGATGTCGGGATGGCTATCGGAGCTGGCACAGACATCGCCATTGAGGCAGCAGACATTGTTCTTATGAAAAATGACTTACAAGATGTTATAACTGCCATTCATCTTTCGAGGAGAACTTTTGCTAGAATTCGCCTCAATTATATTTGGGCTCTTGGTTATAATCTTCTTGCCATTCCGATTGCCGCAGGCGTCTTGTTCCCTTCGACACGGTTTCGGCTACCACCGTGGATCGCCGGAGCTGCCATGGCTGCTTCTTCTGTTAGTGTGGTATGCAGTTCTTTGATGTTGAAGAAGTACAAGAGACCAAAAAAGCTTGATGAAATTGATATTCAAATGAAAGGAATAATAGTTCAATGA 2946 44.98 MLKLPRRKRSPAATNQENANDVATIDDDETAAGAGARKAAEVKVVLCVSGMTCSACAVSVENSIKHLPGILDAAIDFLNDRAQIRYLPNLIDEDSIVKAIENAGFQATISKDSADHRSREVCRIRVNGMGCNSCSSMVESVLEEMYGVQKTHIALFNGEAEVHYDPKVVNSTQFIVAIQDIGFDALLITIGEHISKIELKIDGMDNENSSTKVKESLESVVGIEDVDIDMGLTKVTISYKPDITGPRTFIEVIESIKSEHFKATIYPANVGRENHKEKEIKQHYKYFLWSSALSVPVFLTSMVFMYIPGIKQILDIKVVNMMNVGHLIKWNLSTPVQFIIGSRFYIGSYKALRRGSANMDVLITLGTNAAYFYSVYIVLRAATSPAFDGTDFFETSSMLITFILLGKYLEILAKGKTSEAIAKLKHLAPETATLLTLDGHGNVISEVEISSELIQKNDVIKITPGAKVASDGIVVWGESHVNESMITGEAKPVAKRTGDKVIGGTMNENGVLHIKATHVGSESSLAQIVRLVELSQLAKAPIQKLADHISKYFVPLVILLSFLTWIAWFLAGKLHLYPKSWLPSSMDSFELALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALEFAHKASCIVFDKTGTLTVGKPVVVNVKLMDTIVLEELLELTAATEVNSEHPIAKAIVEYAKQFKEEHNPIWPEAQEFISIPGHGVEAIVRNKKVVVGNKSLMMNNGIEILGETESFLVDAEGMAKTAVLVAVDRTVSGVIVVSDPLKPGAKEVISILKSMEVKSIMVTGDNWGTANSIAKEVGIETVIAEAKPQQKAEEVKNLQTAGHTVAMVGDGINDSPALVAADVGMAIGAGTDIAIEAADIVLMKNDLQDVITAIHLSRRTFARIRLNYIWALGYNLLAIPIAAGVLFPSTRFRLPPWIAGAAMAASSVSVVCSSLMLKKYKRPKKLDEIDIQMKGIIVQ 981
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 8306662 8311153 - Carg02521-RA Car02g01227 143713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01227 981 MobiDBLite consensus disorder prediction 1 24 - -
Car02g01227 981 ProSiteProfiles Heavy-metal-associated domain profile. 196 265 IPR006121 GO:0046872
Car02g01227 981 ProSiteProfiles Heavy-metal-associated domain profile. 121 187 IPR006121 GO:0046872
Car02g01227 981 Pfam haloacid dehalogenase-like hydrolase 644 864 - -
Car02g01227 981 ProSitePatterns Heavy-metal-associated domain. 48 77 IPR017969 GO:0046872
Car02g01227 981 ProSitePatterns E1-E2 ATPases phosphorylation site. 648 654 IPR018303 -
Car02g01227 981 ProSiteProfiles Heavy-metal-associated domain profile. 43 109 IPR006121 GO:0046872
Car02g01227 981 Pfam Heavy-metal-associated domain 124 184 IPR006121 GO:0046872
Car02g01227 981 Pfam Heavy-metal-associated domain 199 256 IPR006121 GO:0046872
Car02g01227 981 Pfam Heavy-metal-associated domain 48 105 IPR006121 GO:0046872
Car02g01227 981 Pfam E1-E2 ATPase 427 624 - -
Car02g01227 981 ProSitePatterns Heavy-metal-associated domain. 126 156 IPR017969 GO:0046872
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g01227 Car-Chr2:8306662 Car15g00097 Car-Chr15:568053 0 dispersed
Car16g00224 Car-Chr16:1251656 Car02g01227 Car-Chr2:8306662 2.87E-49 dispersed
Car02g01227 Car-Chr2:8306662 Car03g00188 Car-Chr3:3161854 0 transposed
Car02g01227 Car-Chr2:8306662 Car07g01115 Car-Chr7:6658148 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01227 K17686 - csv:101220448 1665.2