Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01244 ATGGATTTTTTCACCCAATTTTCTGATCCTATTCCTTATTATGGTAATTATAATTGCAAGTCGGAATCTTCGTCCACTCTGTCAGACGCCGGAACGCCGCCCCACGTGGTCGCTAACTCCGACGAGGAAGTGATACTGGCGTCGAACCGGCCGAAGCGCCGGGCTGGTCGGCGGGTTTTTAAGGAGACGAGGCATCCAGTGTACAGAGGAGTGCGGCGGAGGAATAAAGGCAAATGGGTGTGTGAGCTAAGAGAGCCGAATAAAAAGACGAGGATTTGGCTCGGGACTTACCCAACTGCTGAGATGGCGGCACGTGCACACGACGTTGCGGCACTCGCGTTGAGAGGAAAATCGGCTTGTCTCAATTTTGCTGACTCAGCTTGGCGGTTTCCGATTCCATCGAGTAATGATCCGTCGGTGATTAGAGAAGCGGCGGCGAAGGCGGCGAAAGAATGTGAGTATGAAGAGTGCAATGTGAGTCGGGAAGAGGACGACGTGATTTTGAGTCAGCCAAAGGCGGAGCCTGATCAACGGGATGACGTCGACGATGAGGCTTTGTCGAACATGCCCATGTTGCTTGCCAGCATGGCGGAAGGACCTCTGCTTTCTCCTCCTCGTTTTTGCGTACGCGATGACGTGGAGTGGGACAACGTGGATACAAATGATGATGTGTCATTGTGGAGCTTTTAG 690 52.61 MDFFTQFSDPIPYYGNYNCKSESSSTLSDAGTPPHVVANSDEEVILASNRPKRRAGRRVFKETRHPVYRGVRRRNKGKWVCELREPNKKTRIWLGTYPTAEMAARAHDVAALALRGKSACLNFADSAWRFPIPSSNDPSVIREAAAKAAKECEYEECNVSREEDDVILSQPKAEPDQRDDVDDEALSNMPMLLASMAEGPLLSPPRFCVRDDVEWDNVDTNDDVSLWSF 229
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 8412622 8413311 + Carg02504-RA Car02g01244 143730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01244 229 ProSiteProfiles AP2/ERF domain profile. 67 124 IPR001471 GO:0003700|GO:0006355
Car02g01244 229 Pfam AP2 domain 66 116 IPR001471 GO:0003700|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car02g01244 Car15g01085 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00790 Car-Chr2:5751435 Car02g01244 Car-Chr2:8412622 4.40E-60 dispersed
Car02g01244 Car-Chr2:8412622 Car15g01085 Car-Chr15:8516066 9.09E-23 dispersed
Car02g01243 Car-Chr2:8409741 Car02g01244 Car-Chr2:8412622 6.82E-38 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3043 PF00847 AP2 1.00E-15 CL0081 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01244 - - bhj:120092445 378.252