Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01299 GAAGAGAAAAGGAAAATTAGTTTTTGTGTAAGATTATTTCTGGGAGAAAAGGAAAGAATAGGAATCGAAGAGACAATAATGAAGATTGGAGCGATGGAAGATGTGGCGATAATTGGAGGATTGATTTCAGTGCAGTTCATATACGCTGGAAACTCGGTATTGCTAAGTTATTTGATGTCGTTAGGGCTCAATCCTCTCAACATCGTCATTTATATTGCCTCTGCCACATTTCTATTTTTGGCTCCTCTGGCTGTTTGGTTTGAAAGGAGCAATTGGCCCAAGAAATTGAGTTTCAAGTTGGTGCTTCAGCTTGTTCTGATCTCCTTTGGCGGGGTAACTTTGTTCCAAACTCTGCTATTAGAAGGGATACAGCTGACTTCTCCAGCCATGGCAACTGCCATGCCAAACATTGCTCCTGGTCTCATCTTTATCATTGCCTGGTGTTTTAGATTAGAGAGAGTCAAACTTAGTTGTCTGTACAGCAAAGTTAAGATTTTAGGGACATTGCTTTGTGTAGTGGGCGCCATCATAATGAGCATACTGCACAGCACCATCACGATACCGGCAAAAGAGCAGCTAATTTTTCTTCCTTCATCTGTACTCTTCAATAAGGAAAAGTTTATTGGTTGTTTGTATCTCATGATGGCGGTCTTCGTATTATCAAGCAATGTTGTATTGCAGGCTACAGCCCTTGGTGAATTACCCGCTCCAATGTCGTTGAGTGCTGTAACTTCGTTCATTGGAGTATTAACGACTGCAGTTGTACAACTACTGAAGAATCATAAGTTAGAAACCGAATGGTCAACTGTCAACATGAAGGATTTACTCTGCTACTCTCTATTGGGAGGAATAGTGAGCGGTATAAGCTTGAGCTTCAACGGGTGGGCAATGAAGAAAAGAGGGCCAGTTTTGGTGTCAATTTTCAGTCCTATTGGAACAGTTTTCTCTGTCATTCTCTCTGTCTTCACCTTAGGAGACACTATTTCCATTGGAAGCCTTGCTGGTATGTTCTTGATGTTCTGTGGGCTCTACTTTGTGCTTTGGGCAAAAGGAAAAGAAGGTTACTGTGATGGGAGTGGCTATCAAAGTGATGACTTTGATATTGAGAAACCTTTACTCTCTTGA 1125 41.42 EEKRKISFCVRLFLGEKERIGIEETIMKIGAMEDVAIIGGLISVQFIYAGNSVLLSYLMSLGLNPLNIVIYIASATFLFLAPLAVWFERSNWPKKLSFKLVLQLVLISFGGVTLFQTLLLEGIQLTSPAMATAMPNIAPGLIFIIAWCFRLERVKLSCLYSKVKILGTLLCVVGAIIMSILHSTITIPAKEQLIFLPSSVLFNKEKFIGCLYLMMAVFVLSSNVVLQATALGELPAPMSLSAVTSFIGVLTTAVVQLLKNHKLETEWSTVNMKDLLCYSLLGGIVSGISLSFNGWAMKKRGPVLVSIFSPIGTVFSVILSVFTLGDTISIGSLAGMFLMFCGLYFVLWAKGKEGYCDGSGYQSDDFDIEKPLLS 374
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 8656400 8659229 + Carg02449-RA Car02g01299 143785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01299 374 Pfam EamA-like transporter family 42 179 IPR000620 GO:0016020|GO:0016021
Car02g01299 374 Pfam EamA-like transporter family 208 347 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g01299 Car-Chr2:8656400 Car06g00703 Car-Chr6:4281335 4.49E-138 dispersed
Car02g01299 Car-Chr2:8656400 Car05g00227 Car-Chr5:1189261 1.60E-38 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01299 - - csv:101204100 534.643