Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01302 ATGGAATCCTTCATCACTTCATTTTTGTTCTTCATTTCCATTTCCACTTTCTTTCTTCTATCAACAACTCAACCAATTTCTTCACCCTCTGCCCCACACCGCCGCCACAAGTGGGTCGGACCCACTGGCCATCGGCTGATCAAAGTAGACGGTAACGGCTCCGGCGACTTCCTCACTGTCCAAGCCGCCGTCAATGCAGTCCCGGATTATAACACCGTGAGCACCGTTATCCGAATCAGCCCCGGATATTACGTGGAGAAGGTGGTGGTGGCGGCGACGAAGCCGTACATAACATTTGAAGGAGGAGGGAAAGAGAGGACGGTGATAGAATGGCACGACAGGGCAGGTGACCGAGATCCCAGCGGGCAGCAGCTGCGTACCTACAGAACAGCCTCGGTCACAGTTTTCGCTAATTACTTCTCTGCCCGAAACATCAGCTTCAGGAATACAGCACCGGCGCCGATGCCCGGAATGCAAGGGTGGCAAGCGGCGGCGTTCCGTATATCCGGCGATAAAGCCTATTTTTCCGGGTGCGGGTTCTACGGTGCTCAAGATACGTTGTGTGATGACGCCGGCCGCCATTACTTCAAAGAATGCTACATTGAAGGCTCCATAGACTTTATCTTTGGAAATGGGCGTTCCATGTATAAGGATTGTGAGCTGCACTCCATCGCCACTCGGTTCGGTTCTATAGCGGCACAAGATAGAAACTTGCCGGACGAGAAGACCGGGTTTGCTTTCGTCCGGTGCAAGGTTACCGGTTCAGGACCCGTGTACGTGGGCCGGGCCATGGGCCAGTACTCGAGAATCGTCTACGCGTATACATACTTTGATGACGTGGTGGCCCACGGTGGATGGGATGACTGGGACCACGTCAGCAACAAAAACAAGACGGTATTTTTTGGAGCATACAAATGCTGGGGCCCAGGAGCAAGCAAAGTGAAGGGAGTATCATGGGCCAGGGAGTTGGAGTTTGAAGAGGCCCATCCATTTCTTGTCAAGAGCTTTGTGAATGGTAGGCACTGGATTGCACCCTCCGATGCTTAG 1047 53.01 MESFITSFLFFISISTFFLLSTTQPISSPSAPHRRHKWVGPTGHRLIKVDGNGSGDFLTVQAAVNAVPDYNTVSTVIRISPGYYVEKVVVAATKPYITFEGGGKERTVIEWHDRAGDRDPSGQQLRTYRTASVTVFANYFSARNISFRNTAPAPMPGMQGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCELHSIATRFGSIAAQDRNLPDEKTGFAFVRCKVTGSGPVYVGRAMGQYSRIVYAYTYFDDVVAHGGWDDWDHVSNKNKTVFFGAYKCWGPGASKVKGVSWARELEFEEAHPFLVKSFVNGRHWIAPSDA 348
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 8667745 8669643 - Carg02446-RA Car02g01302 143788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01302 348 Pfam Pectinesterase 49 339 IPR000070 GO:0030599|GO:0042545
Car02g01302 348 ProSitePatterns Pectinesterase signature 2. 201 210 IPR033131 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g01302 Car-Chr2:8667745 Car10g00608 Car-Chr10:3096296 1.65E-104 dispersed
Car15g01027 Car-Chr15:8018790 Car02g01302 Car-Chr2:8667745 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01302 - - cmo:103483059 619.387