Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01316 ATGTCATCCTCTTCTTCTTCTCCTACTTCTTCTACTACTACTACCACTCAGCAGCAGCAGCAGCAGCAGCAGCTGGACCACCACCTTCCCTCACCTGAGCAGCTCTGTTATGTCCATTGTAACATTTGTGACACTGTCCTTGCGGTCAGTGTTCCTTGTTCTAGCTTGTTCAAAACTGTGACTGTGCGATGTGGGCACTGCACCAATCTGCTGCCTGTGAACATGCGTGGCTTGCTTTTGCCTTCCGCTAATCAGTTTCATCAGCTCGGTCACTCTTTCTTTTCTCCTTCCCATAACATTCTGGAAAACATCCCAACGCCAAATTCCAATTATCTCATCAACCAGTTCGCAGCTACTAACACTTTTGGAATGCCAACTCGAGGAGTTGCTGATGAGCTCCCTAGGCCACCAGTCATCAACAGACCTCCGGAGAAGAGACAGAGAGTGCCCTCTGCATACAACCGCTTCATCAAAGATGAGATCCAACGCATCAAGTCAGTGAATCCGGATATATCCCACAGAGAAGCCTTCAGTGCTGCTGCTAAGAATTGGGCACACTTTCCACATATTCACTTTGGTCTCATGCCCGACCAGACAGTGAAGAAGACAAATATCCGGCAGCAGGAGGGAGATCATGGGAGTGTTGTGATGAAAGACAATGGATTCTACGCCGCCGCCGCCGCCGCCTCACCCAACGTTGGTGTCTCCCATTTCTAA 717 49.51 MSSSSSSPTSSTTTTTQQQQQQQQLDHHLPSPEQLCYVHCNICDTVLAVSVPCSSLFKTVTVRCGHCTNLLPVNMRGLLLPSANQFHQLGHSFFSPSHNILENIPTPNSNYLINQFAATNTFGMPTRGVADELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAKNWAHFPHIHFGLMPDQTVKKTNIRQQEGDHGSVVMKDNGFYAAAAAASPNVGVSHF 238
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 8745490 8747559 - Carg08783-RA Car02g01316 143802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01316 238 Pfam YABBY protein 32 194 IPR006780 GO:0007275
Car02g01316 238 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g01316 Car-Chr2:8745490 Car05g01205 Car-Chr5:11394486 1.94E-54 dispersed
Car18g01013 Car-Chr18:10558350 Car02g01316 Car-Chr2:8745490 1.69E-39 dispersed
Car15g01044 Car-Chr15:8220769 Car02g01316 Car-Chr2:8745490 2.80E-131 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3049 PF04690 YABBY 6.40E-71 CL0114 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01316 K25796 - csv:101214748 398.282