Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car02g01367 | ATGGCTGGTTTGGATTTAGGCAATCGCTATATTCACCAACTTCAAAGACATGATTTCAACCTTCATCACCCGCACCACCACCCTGATTCTCAATCTCACCATGAAGACGAATCAGATCAGCCGTTGGATTTTGTCTCCGCCGCCCCCGCCGCCACTGACATGGCGGTCTCTCGCCGTCCCCGTGGCCGTCCAGCTGGCTCCAAGAACAAACCCAAGCCCCCGGTTATCATTACCCGGGAAAGCGCCAATACCCTAAGGGCTCATATTTTTGAAGTTGGGAGCGGCTGCGATGTCTTTGATAGCATCGCTATCTACGCCCGCCGCCGCCAGCGGGGGATATGCATCTTGAACGCCAACGGAATGGTAACTAATCTCAACTTACGCCAACCGACCGGGACGGGCGCTGTCTTAAACCTACAAGGGAGGTTCGAGATATTATCGCTTACCGGATCTTTCCTCCCGCCGCCTGCTCCTCCCGGCGCTACTAGTTTGACTATATATTTAGCCGGTGGTCAAGGGCAAGTCGTCGGTGGGAATGTTGTCGGAGAGTTGGTGGCAGCCGGGCCAGTAACCGTCATCGTCGCATCGTTCGCGAATGTAGCATACGAGAGACTCCCACTCGAGGACCAAGAACAAGAACAAGAACAAGATCATATGCAACCACCAACGTCCCAGGGCGGTGGAGGCAGCGGCCCGTTTCCAGATCCGTCTTCAGGGCTTCCTTTCTTCAATTTGCCTCTAAATATGCAGAACCAAATTCAGCTACCATTCTAA | 774 | 53.62 | MAGLDLGNRYIHQLQRHDFNLHHPHHHPDSQSHHEDESDQPLDFVSAAPAATDMAVSRRPRGRPAGSKNKPKPPVIITRESANTLRAHIFEVGSGCDVFDSIAIYARRRQRGICILNANGMVTNLNLRQPTGTGAVLNLQGRFEILSLTGSFLPPPAPPGATSLTIYLAGGQGQVVGGNVVGELVAAGPVTVIVASFANVAYERLPLEDQEQEQEQDHMQPPTSQGGGGSGPFPDPSSGLPFFNLPLNMQNQIQLPF | 257 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 9050395 | 9051168 | + | Carg08834-RA | Car02g01367 | 143853 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car02g01367 | 257 | MobiDBLite | consensus disorder prediction | 209 | 241 | - | - | |
| Car02g01367 | 257 | MobiDBLite | consensus disorder prediction | 52 | 75 | - | - | |
| Car02g01367 | 257 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 86 | 198 | IPR005175 | - | |
| Car02g01367 | 257 | MobiDBLite | consensus disorder prediction | 217 | 231 | - | - | |
| Car02g01367 | 257 | ProSiteProfiles | PPC domain profile profile. | 82 | 219 | IPR005175 | - | |
| Car02g01367 | 257 | MobiDBLite | consensus disorder prediction | 20 | 40 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Car02g01367 | Car-Chr2:9050395 | Car14g01831 | Car-Chr14:14239553 | 7.37E-95 | dispersed | |
| Car16g01091 | Car-Chr16:9371877 | Car02g01367 | Car-Chr2:9050395 | 4.12E-88 | wgd | |
| Car19g00198 | Car-Chr19:1863338 | Car02g01367 | Car-Chr2:9050395 | 1.45E-86 | wgd | |
| Car02g01367 | Car-Chr2:9050395 | Car06g00585 | Car-Chr6:3358808 | 3.21E-79 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car02g01367 | - | - | cmo:103503535 | 348.206 |