Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01377 ATGGGATCTTATGGCACCCCAAAAACTTGGATACCATATATGAGCAACAAAGATTGCTCTCAAGGGTTCTGTAGTGTATATTGTCCTCAGTGGTGTTACATCATGTTTTCACCTCCACCACCCTTAGAGTTTCCAGATGATGATTCAGGCCCAAATTTTTCACCTCTTGTGATTGCAATTATTGGAATTCTGGCTAGTGCTTTTCTTCTTATAACCTATTACACCATCATTTCAAAGTATTATGGCAACACGAGCCGCTTGTCTAGGACTCAAGATCATGACCCAAATCAGGAGTTTGAAGATACTCACAACCCAACACTCCACGAGCCGTGGCATGTCGCCACTACTGGCTTGGATGAAGCATTGATCAAGTGCATTACGGTTTGCAAGTACAAGAGAGGAGATGGGTTGGTTGAAGGCTCTGATTGCTCTGTTTGCCTCAGTGAGTTTCAAGAAGATGAGAACCTTAGGTTGTTGCCTAAATGCAGCCATGCTTTTCATCTTCAATGTATTGATACTTGGCTCAAATCACACTCCAATTGCCCGTTGTGCCGTGCAAACATCGTCTCTGTCACTGCTTCTTCTCCACTTCAACTGCCTGCAACCACTGGAAACCCCACAACTAATGAGGCCATTCCAGAGACCTCTCAGGCAAATGACCATGAGGGTATTTCACAGGAACCTGGAAGAAGTTTTGGCAATGACAATGCTAAGAACTCAGTTCGCGCTTTCAGTGACCTTGGAAATTTGGTGAAAAGAGATACTGTCATTGAGCTTAGAGATGGAAGATTGCAGCAAATTAGAAGGTCCATTTCAATGGATCATTGCAGCCAAAACCATATCATTATCGCAGATGAGTTTGGAGGCATTGATGAAGCAGGAAGCTCAGGTGATGTTGGATCATCCAAACATTCAATGGGAGAAGACAGCAAGTCAAATCATAGAAAAAGAATCCTACATTGTGTGATGAGTCCTGTCTCAATGAAGAGATCATTCTCAAGTGGAAGATTTTCTCTCACGAAACATGGAAGAGAACACAGAGGACTTGCCCCTGTCTGA 1059 43.34 MGSYGTPKTWIPYMSNKDCSQGFCSVYCPQWCYIMFSPPPPLEFPDDDSGPNFSPLVIAIIGILASAFLLITYYTIISKYYGNTSRLSRTQDHDPNQEFEDTHNPTLHEPWHVATTGLDEALIKCITVCKYKRGDGLVEGSDCSVCLSEFQEDENLRLLPKCSHAFHLQCIDTWLKSHSNCPLCRANIVSVTASSPLQLPATTGNPTTNEAIPETSQANDHEGISQEPGRSFGNDNAKNSVRAFSDLGNLVKRDTVIELRDGRLQQIRRSISMDHCSQNHIIIADEFGGIDEAGSSGDVGSSKHSMGEDSKSNHRKRILHCVMSPVSMKRSFSSGRFSLTKHGREHRGLAPV 352
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 9087864 9088922 + Carg08844-RA Car02g01377 143863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01377 352 MobiDBLite consensus disorder prediction 199 237 - -
Car02g01377 352 ProSiteProfiles Zinc finger RING-type profile. 143 185 IPR001841 -
Car02g01377 352 MobiDBLite consensus disorder prediction 293 314 - -
Car02g01377 352 Pfam Ring finger domain 142 185 IPR001841 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g01377 Car-Chr2:9087864 Car08g00892 Car-Chr8:5978241 1.32E-64 dispersed
Car17g00148 Car-Chr17:936823 Car02g01377 Car-Chr2:9087864 1.45E-30 dispersed
Car06g01042 Car-Chr6:7855369 Car02g01377 Car-Chr2:9087864 1.16E-86 transposed
Car14g01725 Car-Chr14:13632281 Car02g01377 Car-Chr2:9087864 2.16E-80 transposed
Car20g00755 Car-Chr20:4423999 Car02g01377 Car-Chr2:9087864 1.26E-25 transposed
Car19g00344 Car-Chr19:5318670 Car02g01377 Car-Chr2:9087864 4.77E-43 wgd
Car19g00188 Car-Chr19:1723937 Car02g01377 Car-Chr2:9087864 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01377 - - cmo:103503554 643.269