Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01378 ATGAGTATTGATGCTCTTTCCTCCAATGACCTGTTCAACTTAATCATCTACGACGCTATCTCTCCGACGCCGAACACTTCCCACGGCGTCTGCGACTCGTCGGAGACTACTTTTTTCTCCGACGAAAAGGGTTTGAAGCATCAAAATCACCACCAACATGGCACGTTGGAACACCGGCCGAAACCCAATTTGGCGAGAAAACGCCACCCGAACGAGGCGGAAAGCAGCAACTGGGGAGCGGTCGGGTTGCAGCAAGGGAAGAAGAAAAGGAAGAGAAAACCAAAAGCTTGTAAGAACAAAGAAGAAGCTGAAACACAAAGAATGACACACATTGCTGTTGAAAGGAACCGGCGTAAGCTGATGAGTGAGCATCTCTCAGTGTTGCGTTCCCTCATGCCTGAATCCTATGTTCAAAGGGGTGACCAAGCATCCATAGTAGGAGGAGCAGTGGAGTTTGTGAAGGAATTGGAGCATGTTCTATCAACTCTTGAAGCCAAGAAGCTGCAAATTTTGCACCAAGAAATAGAAGAAAAACAAGAGAATTATAAGAATGAAGATTCAGTGAGAAGGAAGTTGTTTTCAGATAGTAACAGCTCTCAGTACTCAGCCAAATCCAAGGCTTCTTCAGCTGACATTGAAGTCACTTTGATTGAAACTCATGCGAATCTCAGAATCCTTTCAATAAGAACACATAGACAGCTGTTGAAGCTCATTGCTGGCTTGCAGGCTCTTCGTCTCACTATTCTTCATCTTAATGTCACGGACTTTCATCCATTGGTTCTTTACTCTATTAGCCTTAAGGTGGAAGAAGGGTGCCAACTGAGATCAGTGGATGACATAGCAGCGGCAGCACATGAAATGGTTAGAATAATTGAGGAAGAAGGTGTTTTGTGTTAA 897 44.59 MSIDALSSNDLFNLIIYDAISPTPNTSHGVCDSSETTFFSDEKGLKHQNHHQHGTLEHRPKPNLARKRHPNEAESSNWGAVGLQQGKKKRKRKPKACKNKEEAETQRMTHIAVERNRRKLMSEHLSVLRSLMPESYVQRGDQASIVGGAVEFVKELEHVLSTLEAKKLQILHQEIEEKQENYKNEDSVRRKLFSDSNSSQYSAKSKASSADIEVTLIETHANLRILSIRTHRQLLKLIAGLQALRLTILHLNVTDFHPLVLYSISLKVEEGCQLRSVDDIAAAAHEMVRIIEEEGVLC 298
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 9090290 9091998 - Carg08845-RA Car02g01378 143864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01378 298 MobiDBLite consensus disorder prediction 46 107 - -
Car02g01378 298 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 105 156 IPR011598 GO:0046983
Car02g01378 298 Pfam Helix-loop-helix DNA-binding domain 106 157 IPR011598 GO:0046983
Car02g01378 298 Coils Coil 165 188 - -
Car02g01378 298 MobiDBLite consensus disorder prediction 46 73 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g01378 Car-Chr2:9090290 Car05g00466 Car-Chr5:2652809 6.63E-68 dispersed
Car19g00187 Car-Chr19:1719740 Car02g01378 Car-Chr2:9090290 9.73E-12 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3058 PF00010 HLH 2.50E-08 No_clan Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01378 - - cmax:111466851 376.326