Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car02g01399 | ATGCAGCCCATTATGCCCCCTTATGGTACCCCTCCACATCCCTATGTTGCAATGTATCCCCATGGTGGCATCTATGCTCATCCACCTATTCCTCCGGGATCATATCCTTACAGTCCTTTTGCTATAGCTTCTCCAAATGGAATTGCTGAGGCTTCTGGTAATACACCAGGCAACATGGAAGGGGATGGTAAGCCCTCTGAGCTGAAAGAAAAGTTGCCAATTAAAAGATCGAAAGGAAGTCTGGGAAGTTTAAACATGATCACTGGGAAGAACAACGAGCTTGGTAAACCATCAGGAGCATCTGCTAATGGAGTTTATTCTAAAAGCGCTGAAAGTGAAAGTGAAGGTTCAAGCGAAAGAAGTGATGCTGACTCTCAAAATGATTCACAACTAAAATCTGGATCTGGGAAAGATTCTTTAGAAGGTGGAGGGACTCCTAATGGTTTAATGCATGGTTCTCAGAATGAAGGACATAGTCTCGCTCATCCATTGGTGAACCAAACAATGTCCATAATACCAATTCAAGCTTCTGGAGCTGTTTCAGGTCCTGCTACAAATTTGAATATAGGAATGGATTATTGGGGTACTCCTACAACTTCTGCCATCCCTTCATTGGGTGGGAAGGTCCCTTCCGCTCCAGTTGTGGGAGCTGCTGCTGCTGGGTCACGGGACAGCATTCAGTCACAGATGTGGTTACAGGATGAAAGAGAGCTAAAAAGGCAAAAAAGGAAGCAGTCAAACAGAGAATCTGCTCGTAGGTCTCGGTTGCGTAAACAGGCTGAATGCGACGAGCTTTCTCATCGTGCCGAAGCTTTGAACGAAGAAAATGCGAGTCTTAGGTCCGAAGTGGATAGGATTAGGAGTGAGTACGAGCAACTTCTTTCAGAGAATGCTTCTCTCAAGAGGAGGCTTGGAGAAAGTGATGGAAAAGAAGATCCAAGAGCCACCAAAGATGGCCAAAATGTGAATAAAGAACCTCAGCGTACATCCCGGACCGAGTTCACCAAGGGGTAG | 1014 | 45.66 | MQPIMPPYGTPPHPYVAMYPHGGIYAHPPIPPGSYPYSPFAIASPNGIAEASGNTPGNMEGDGKPSELKEKLPIKRSKGSLGSLNMITGKNNELGKPSGASANGVYSKSAESESEGSSERSDADSQNDSQLKSGSGKDSLEGGGTPNGLMHGSQNEGHSLAHPLVNQTMSIIPIQASGAVSGPATNLNIGMDYWGTPTTSAIPSLGGKVPSAPVVGAAAAGSRDSIQSQMWLQDERELKRQKRKQSNRESARRSRLRKQAECDELSHRAEALNEENASLRSEVDRIRSEYEQLLSENASLKRRLGESDGKEDPRATKDGQNVNKEPQRTSRTEFTKG | 337 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 9195983 | 9201102 | - | Carg08866-RA | Car02g01399 | 143885 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car02g01399 | 337 | Pfam | bZIP transcription factor | 235 | 297 | IPR004827 | GO:0003700|GO:0006355 | |
Car02g01399 | 337 | MobiDBLite | consensus disorder prediction | 48 | 159 | - | - | |
Car02g01399 | 337 | Coils | Coil | 255 | 303 | - | - | |
Car02g01399 | 337 | Pfam | G-box binding protein MFMR | 2 | 31 | IPR012900 | - | |
Car02g01399 | 337 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 237 | 300 | IPR004827 | GO:0003700|GO:0006355 | |
Car02g01399 | 337 | MobiDBLite | consensus disorder prediction | 294 | 337 | - | - | |
Car02g01399 | 337 | MobiDBLite | consensus disorder prediction | 220 | 262 | - | - | |
Car02g01399 | 337 | Pfam | Disordered region downstream of MFMR | 70 | 203 | - | - | |
Car02g01399 | 337 | MobiDBLite | consensus disorder prediction | 301 | 321 | - | - | |
Car02g01399 | 337 | MobiDBLite | consensus disorder prediction | 81 | 112 | - | - | |
Car02g01399 | 337 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 242 | 257 | IPR004827 | GO:0003700|GO:0006355 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Car02g01399 | Car06g00559 | CCT | |
Car02g01399 | Car16g01124 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car02g01399 | Car-Chr2:9195983 | Car03g00698 | Car-Chr3:6103484 | 5.37E-53 | dispersed | |
Car16g01124 | Car-Chr16:9650808 | Car02g01399 | Car-Chr2:9195983 | 2.64E-142 | wgd | |
Car02g01399 | Car-Chr2:9195983 | Car06g00559 | Car-Chr6:3160924 | 6.05E-162 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
3064 | PF16596 | MFMR_assoc | 5.40E-49 | No_clan | Car | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car02g01399 | K09060 | - | csv:101214217 | 578.941 |