Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01412 ATGTCCCTTCTCAGTAGATTCTTTTACAGAAGACCCCCAGATGGGTTGCTCGAATTTGTTGAGCGAGTATATATTTTCGATTCGTGTTTTTCCACTGATGTATTGCCCGATGGTATGTACCAAATATATCTGCATGAAATCATAAACGAATTACATGAAGAATTCCCAGACTCCTCCTTCCTTGCATTTAATTTTCGTGAAGGAGAGAAAATGAGCCAATTTGCAGAAATGTTGTGCGAATATGATGTCACTGTGATGGATTATCCTCGACAATATGAAGGGTGCCCTCTTCTTCCATTGTCTTTAATACAGCACTTCCTACGTGTTTGTGAAAGTTGGCTTCTGCTTGGTAATCAACAAAATATCATTCTTCTCCACTGTGAGAGGGGAGGTTGGCCACTCTTAGCATACCTTTTAGCTAGCTTTTTGATTTATAGAAAATTGCACAGTGGTGAGAGGAAAACTCTTGAAATTGTACATCGAGAAGCTCCCAAGGGGTTTTTGCAGCTCTTGTCACCATTAAATCCATTTCCATCTCAGCTCCGCTACTTGCAATATGTTGCAAGGAGAAATATAGTCTCTGAGTGGCCACCACCTGAGCGAGCACTCTCTTTAGATTGTGTAATTCTTCATGGTGTTCCGGGTTTTGATTCTCAGAATGGCTGCAGACCAGTTATTCGTATCTTTGGGAGAAATCTTTTCAGTAAGGGTGGGCTTTCCACCCAAATGATTTTTTCCATGCCCAAGAAAAATAGGGTCCTCCGTCATTACCGCCAGGTAGACTCTGATGTGATTAAAATAGATGTGCAGTGTTTGGTTCAAGGAGATGTAGTGTTGGAGTGTTCACATTTGGAATCAGAACCAGAAAGGGAAGTTATGATGTTTCGTATAATGTTCAACACAGCATTTATTCGATCAAACATACTGATACTAACTTCTGAAAATCTGGACATTCTTTGGGATTCAAAGGAACGCTATCCAAAAGGCTTTCGAGCTGAGGTTATTTTGTTTGGGGAGATAGAATGCATCTCCCCTCCAAGGGCTCCAACCACAATTTTGAATGGCGAAGAGAAAGGTGGATTACCAATTGAAGCTTTTTCCAGGGTTCAAGAACTTTTTAGTGGTGTGGATTGGATGGATACCAATGATGATGTTGCCTTGTGGCTACTGAAAAATCTTTCTGCCTTGAGTGACGTGAAAGAATTGTCAGGATGGCAAACTAAAGCAAGTTCATATTCCTCACCCGTGGATTCTGAAGAGGAAAATAATACGTCTAGCACTGCTGACAGTTCAGATGAAGTATTCGATAGTATGACAAAGTCCTTAGTTGATTTAGCTTCTACCAATTTTACAATTCCAGCTGTGGTACGTTCTTCTGAATTATTGTCTGGCAAGATCGGTGCTACTGAAGTGAATGTTTCACCAGAATCTCCTCAAACTTTTGATGAATGTCAGGATGAAGTCTTTTTAAATAAAGAATCTCTACCGTCTTCATCACCTCCATTATCTTCTCATAGTTCCTCACCCCCTCCTATAAGTTCTTTAATGCCATCACAACTGTTGCCTCCTAATGTACCATCTACCGATGTTAGTGGGGAACTTGTCTCGAACAAGATGACACCCACTGTTAAAGTGATTCCTCCTCCGCCACCCCCACCCCCACCACAACCTTTTTCTTCATCTCATAATAAACCTCATGTAGAAACTTCCATGAGTTCTGACTCAACGTCCATAACAGTGCATGGGATACCCTCTCCTTCGCTTTCACTTGTTCATAAATCCTCTAGTGCTCCTCCACCCCCACCTCCACCTCCACCTCCCCTCCCAAAAACAACTGGTGTTCCACTGCCACCTCCTTCTTTTGTTGAAAAATCTTCTAGTGCTCCTCCACCTCCGGTTCCGAATTCTTTTGGTGCTCCCCCGCCTCCACCTCCACCTCCACATCCACCTCTAATTCCAAAATGTTCTAGTGCTCCTCCACCTCCTCCTCCGCCTCCAATTTTGAAATGTTCTAGTGCTCCTCCACCTCCACCTCCACCACCTATTCCAAAGTCTTCTAGTGCTCCTCCACCCCCACCTCCTCTTCCACAATCAAATCGTGGCATGACACCAGTTCCACCTCCTCCACCACCAAAACCTCCTGGTGTGGAGCTACCAAGTCAGGGTACTAAACCAACTAGGCCTCCTCCACCTCCTCCACCAACAAAGGCGTTTAGTTCTAATCCTCCGACAAGTCGTGGTGCTACACCAATGCCACCCCCTCTGCCCGGATCAACACGGTCAAATGTACCACCCCCTCCTGATGGAAGGGGGAAATCTTCTCCAGGATCAACAACTCAAGGAAGTGGTCGAGTTGCCACAGGAGTTGTAAATGCTCCAAAGAAAACCACTTTGAAACCATTGCACTGGGTAAAAGTTACTCGAGCAATGCAAGGGAGTTTATGGGCTGACTCACAAAAGCAGGAGAATCAATCAAGGGCCCCAGAAATAGACATCTCTGAACTTGAAAGTCTATTCTCAGCAGCCTCTGCATCTGATGGAAGTGGCAGCAAAAGTGGAGGACGACGTGCTTCCAACATCAACAAACCTGAAAAAGTGCAACTGATTGACTTGCGGAGAGCATATAACTGTGAAATCATGCTCTCAAAAATAAAGATTCCCTTACCGGATATGATAAATTCAGTTCTTGCATTGGATTCTTCTGCTCTTGATATTGACCAGGTTGAGAATCTCATCAAGTTCTGTCCTACGAGGGAAGAAATGGAAACGTTGAAGAATTATACAGGTGACAAAGCAATGCTTGGAAAGTGTGAGCAGTTTTTTCTCGAGTTAATGAAGGTCCCACGAATAGAGCCTAAGTTACGAGTATTTGCTTTCAAAATTACCTTTTCAAGCCAGGTGAAGGATTTGAGATATAATTTGAATACAATAAATGATGCTACAAGAGAGGTCAAAGGATCTGAAAAATTGCGTCAAGTAATGCAAACAATTCTTACATTGGGGAATGCGTTAAACCAGGGTACTGCTCGAGGCTCTGCTATAGGTTTTAAGTTGGACAGCCTTCTTAAATTGTCTGACACTCGGGCAAGAAACAACAAAATGACTTTGATGCATTATTTATGTAAGCTTCTTGCAGAGAAAATGCCAGAGTTACTTGATTTTGACAAGAACCTTGTTCATTTAGAAGCTGCCTCTAAGATTCAATTGAAAGCATTGGCTGAAGAAATGCAAGCTGTGAGTAAAGGTCTTGAAAAGGTGGAGCAAGAGCTAACTGCTTCTGAAAATGACGGTGCTATCTCTATTGGTTTCCAGAAGGTTCTGAAGAATTTTCTTGATACTGCTGAAGCTGAAGTAAGGACACTCATCTCCTTATATTCTGTAGTGGGGAGAAACGCTGATTCATTATCCCAGTACTTTGGCGAGGATCCAGCTCGGTGCCCCTTTGAGCAAGTGACTCAAATTTTGATAGTTTTTGTTAAGATGTTCAAGAAGTCACGCGAAGAAAATGTAAGGCAGGCTGATGCTGAAAAGAAAAAAATAGAGAAGGAAGCCATGAAAGAAAGAAATTTTGTAAAAGCAAAGTTGGCTCTTCGCCTTCCTGCATTACCATTTCTTTCATTGATACTGTTTTGTAAATATACCGTGATCCGACTCGGGGAGTGGTTGCAGTTTGCCAATCCGAACTCGACACTGTCATTACGGTAA 3705 42.83 MSLLSRFFYRRPPDGLLEFVERVYIFDSCFSTDVLPDGMYQIYLHEIINELHEEFPDSSFLAFNFREGEKMSQFAEMLCEYDVTVMDYPRQYEGCPLLPLSLIQHFLRVCESWLLLGNQQNIILLHCERGGWPLLAYLLASFLIYRKLHSGERKTLEIVHREAPKGFLQLLSPLNPFPSQLRYLQYVARRNIVSEWPPPERALSLDCVILHGVPGFDSQNGCRPVIRIFGRNLFSKGGLSTQMIFSMPKKNRVLRHYRQVDSDVIKIDVQCLVQGDVVLECSHLESEPEREVMMFRIMFNTAFIRSNILILTSENLDILWDSKERYPKGFRAEVILFGEIECISPPRAPTTILNGEEKGGLPIEAFSRVQELFSGVDWMDTNDDVALWLLKNLSALSDVKELSGWQTKASSYSSPVDSEEENNTSSTADSSDEVFDSMTKSLVDLASTNFTIPAVVRSSELLSGKIGATEVNVSPESPQTFDECQDEVFLNKESLPSSSPPLSSHSSSPPPISSLMPSQLLPPNVPSTDVSGELVSNKMTPTVKVIPPPPPPPPPQPFSSSHNKPHVETSMSSDSTSITVHGIPSPSLSLVHKSSSAPPPPPPPPPPLPKTTGVPLPPPSFVEKSSSAPPPPVPNSFGAPPPPPPPPHPPLIPKCSSAPPPPPPPPILKCSSAPPPPPPPPIPKSSSAPPPPPPLPQSNRGMTPVPPPPPPKPPGVELPSQGTKPTRPPPPPPPTKAFSSNPPTSRGATPMPPPLPGSTRSNVPPPPDGRGKSSPGSTTQGSGRVATGVVNAPKKTTLKPLHWVKVTRAMQGSLWADSQKQENQSRAPEIDISELESLFSAASASDGSGSKSGGRRASNINKPEKVQLIDLRRAYNCEIMLSKIKIPLPDMINSVLALDSSALDIDQVENLIKFCPTREEMETLKNYTGDKAMLGKCEQFFLELMKVPRIEPKLRVFAFKITFSSQVKDLRYNLNTINDATREVKGSEKLRQVMQTILTLGNALNQGTARGSAIGFKLDSLLKLSDTRARNNKMTLMHYLCKLLAEKMPELLDFDKNLVHLEAASKIQLKALAEEMQAVSKGLEKVEQELTASENDGAISIGFQKVLKNFLDTAEAEVRTLISLYSVVGRNADSLSQYFGEDPARCPFEQVTQILIVFVKMFKKSREENVRQADAEKKKIEKEAMKERNFVKAKLALRLPALPFLSLILFCKYTVIRLGEWLQFANPNSTLSLR 1234
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 9268644 9278141 + Carg08879-RA Car02g01412 143898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01412 1234 Coils Coil 1163 1183 - -
Car02g01412 1234 MobiDBLite consensus disorder prediction 595 739 - -
Car02g01412 1234 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Car02g01412 1234 MobiDBLite consensus disorder prediction 493 538 - -
Car02g01412 1234 MobiDBLite consensus disorder prediction 493 794 - -
Car02g01412 1234 Coils Coil 1069 1096 - -
Car02g01412 1234 MobiDBLite consensus disorder prediction 543 560 - -
Car02g01412 1234 MobiDBLite consensus disorder prediction 772 786 - -
Car02g01412 1234 MobiDBLite consensus disorder prediction 746 771 - -
Car02g01412 1234 Pfam C2 domain of PTEN tumour-suppressor protein 199 336 IPR014020 -
Car02g01412 1234 ProSiteProfiles Formin homology-2 (FH2) domain profile. 788 1188 IPR015425 -
Car02g01412 1234 Pfam Formin Homology 2 Domain 793 1163 IPR015425 -
Car02g01412 1234 MobiDBLite consensus disorder prediction 409 433 - -
Car02g01412 1234 MobiDBLite consensus disorder prediction 561 594 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g01277 Car-Chr1:11572988 Car02g01412 Car-Chr2:9268644 4.80E-154 dispersed
Car02g01412 Car-Chr2:9268644 Car10g00196 Car-Chr10:937448 4.14E-133 dispersed
Car19g00151 Car-Chr19:1331078 Car02g01412 Car-Chr2:9268644 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01412 - - cmos:111464075 966.837