Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01419 AAGTCTCGTCTCGTCTGTTCTCTAACTGTTGAAGTGATCGGAACCTGCTTACTGATCTTGATGGCGAAAACTGGTGTGTTTGATTCTAATCCTACAGTCGTGGGGAAGGCTACGGATTTGAAGAGGGAGTTACAGAAGCTGATCGTTGCTATAATTGACGATGATAATTTCTCCATAGACGCTATTGATCAAGCTAAAGAGATTCTTTGTGCGCTCAAGGAGTTGAAACTCAGGAAGAGATCACGCTCTTCGAATCTCTACGAGAATCTCATTTGCCCTGATGAATTCCGTTGTCCGCTTTCCACAGAGCTCATGAGAGATCCTGTTGTTGTCTCAACTGGCGAGACATTCGACAGACCCTTCATTCAAAAATGGTTGAAATCAGGAAACCGAACGTGCCCAAGAACTCAGCAAGTTCTTTCACACACGAACCTTACTCCCAATCACTTGATTCGTGGAATGATATCTCGGTGGTGTAGTAGTCGGGGAATTGAGTTGCAAGATCGTGTCCATTATCTTGATGATGATATAATAACAGAGGCTGATCGGGGCCGTTTTCATACGTTAATAGAGAAAATGTCTGCAACATTACCTGAACAAAAAGCTGCTGCTAAGGAGCTTCGGATGTTGACAAAGCGGATGCCCTCATTTCGAGCACTTTTTGGTGAGTCCCATGATGCCATCTCTTTGTTGCTTAGTCCACTTTGTGGAGATAAATCCCAAAGCAGTGTTCATGCGGATCTGCAAGAAGATTTGATCACAACCCTCTTGAATCTGTCAATCCATGACAACAACAAGAAACTTGTTTGTGAAACTCCCAAGGTAGTACCTCTTCTAATGGAAGCATTGAGATCAGGAACCATGGAAACAAGGAGCAATGCAGCTGCCGCCCTTTTCACTCTGTCAGCTCTCGACTCAAACAAAGTACTGATCGGGAAAGCTGGTGCCTTGAAACCACTCATCGACCTTTTAGATGAGGGGCATCCATTATCTATCAAAGATGCTGCTTCAGCAATATTTAATCTTTGTATAATTCATGAAAATAAAGCAAGAGCTGTGAAAGATGGTGCAGTTCGAGTGCTTCTGAAAAAGATCATGAACCAAATGCACGTTGATGAGTTGTTGGCTATTCTAGCAATGCTTTCGAACCATCCAAAAGCTATTGAGGAAATGGGAGAGCTTAGAGCTGTTCATTCCCTGCTCAGAATTATCAGGGAAAGTACTTGTTCACGTAACAAGGAAAATTGCATTGTGATCATCCATGCTATTTGCTTATACGATCGAACCCAGTGGAAGGACATGAGGGAGGAGGAGAAATGCTATCGAACCATTTCTGAACTTGCTCAGAATGGGACTTCAAGAGCCAAGAGAAAGGCCAGTGGCATACTCGAGAGACTGAACAGGGTAGTTAATACGACCCATACTACATAA 1431 43.33 KSRLVCSLTVEVIGTCLLILMAKTGVFDSNPTVVGKATDLKRELQKLIVAIIDDDNFSIDAIDQAKEILCALKELKLRKRSRSSNLYENLICPDEFRCPLSTELMRDPVVVSTGETFDRPFIQKWLKSGNRTCPRTQQVLSHTNLTPNHLIRGMISRWCSSRGIELQDRVHYLDDDIITEADRGRFHTLIEKMSATLPEQKAAAKELRMLTKRMPSFRALFGESHDAISLLLSPLCGDKSQSSVHADLQEDLITTLLNLSIHDNNKKLVCETPKVVPLLMEALRSGTMETRSNAAAALFTLSALDSNKVLIGKAGALKPLIDLLDEGHPLSIKDAASAIFNLCIIHENKARAVKDGAVRVLLKKIMNQMHVDELLAILAMLSNHPKAIEEMGELRAVHSLLRIIRESTCSRNKENCIVIIHAICLYDRTQWKDMREEEKCYRTISELAQNGTSRAKRKASGILERLNRVVNTTHTT 476
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 9320048 9323938 + Carg08886-RA Car02g01419 143905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01419 476 Pfam Armadillo/beta-catenin-like repeat 307 343 IPR000225 GO:0005515
Car02g01419 476 Pfam U-box domain 93 162 IPR003613 GO:0004842|GO:0016567
Car02g01419 476 ProSiteProfiles U-box domain profile. 91 165 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g01419 Car-Chr2:9320048 Car01g00541 Car-Chr1:3209827 4.85E-91 dispersed
Car12g00944 Car-Chr12:9545365 Car02g01419 Car-Chr2:9320048 4.42E-124 transposed
Car19g00142 Car-Chr19:1224494 Car02g01419 Car-Chr2:9320048 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01419 - - csv:101215688 758.444