Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01420 ATGGGGCCGGGCTTCGTGGCCTTGTCTGGCGCTGCAAAACAGGCCGAGCTTCTCCGAAAAGATGGAAACCACTATTTTCAAAAAGGTAGAATCGGAGCCGCCATTGAAGCCTACACCGAGGCGATTACGCTATGCCCGAATGTTGCTGTGTATTTGACGAACCGCGCTTTGTGTCATCGCAAGCGGAAGTATTTTTTTCTTATGGTATATAGTGATTGGAAGAAGGTGGAGGAGGATTGCCGGAGAGCTATTCAGATTGATAGCAATTCTGTGAAGGGACATTATATGTTAGGCCTAGCATTAATACAAAATAATGTATATCCAGAAGGAATCAAGCATTTGGAGAAGGCTTTGGATCTTGGTAGGGGTGCAAATCCAAAGAGTTATATGGTTGAGGAAATATGGCAGGAGCTTGCAAAAGCAAAATACAGGGAGTGGGAAAAAGCTTCTACCAAACGTTCATGGGAATTACAGACCTTGAAAGAAGCTTGTGAGGCAGCCCTTGAACAAAAGTATTTTCTTGACCATTCTGAACTAGAAGGGTTTGTAGATGAAGCTGAAATTGCTCATAGGAAACAATTAAAGTCTCTAAGAAGTGTGTTTAAAAAAGTTGGGGAGGCGGATGCGCCATCCGAGGTGCCTGATTATCTTTGTTGTAAAATTACACTTGATATTCTTCGTGATCCCGTTATTACTCCGAGCGGGGTTACATATGAGAGAGCAGTGATACTCGACCATTTTCGAAAGGTGGGTAACTTCGATCCCTTAACGCGTGAACTGCTCGATGAGTCGCAACTTGTACCGAATTTAGCCATAAAGGAAGCAGTAGAAGCCTTTCTAGATAAGCATGGATGGGCTTATAATACAGATTAA 873 43.3 MGPGFVALSGAAKQAELLRKDGNHYFQKGRIGAAIEAYTEAITLCPNVAVYLTNRALCHRKRKYFFLMVYSDWKKVEEDCRRAIQIDSNSVKGHYMLGLALIQNNVYPEGIKHLEKALDLGRGANPKSYMVEEIWQELAKAKYREWEKASTKRSWELQTLKEACEAALEQKYFLDHSELEGFVDEAEIAHRKQLKSLRSVFKKVGEADAPSEVPDYLCCKITLDILRDPVITPSGVTYERAVILDHFRKVGNFDPLTRELLDESQLVPNLAIKEAVEAFLDKHGWAYNTD 290
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 9324369 9328432 - Carg08887-RA Car02g01420 143906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01420 290 Pfam U-box domain 213 285 IPR003613 GO:0004842|GO:0016567
Car02g01420 290 ProSiteProfiles TPR repeat profile. 15 48 IPR019734 GO:0005515
Car02g01420 290 ProSiteProfiles U-box domain profile. 212 286 IPR003613 GO:0004842|GO:0016567
Car02g01420 290 Pfam Tetratricopeptide repeat 25 47 IPR019734 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g01420 Car-Chr2:9324369 Car09g00706 Car-Chr9:4197145 2.56E-11 dispersed
Car19g00141 Car-Chr19:1215612 Car02g01420 Car-Chr2:9324369 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01420 K09561 - csv:101215457 513.072