Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01451 ATGACCCCAGTTTCCCGTAAGATCTGTATCCACCACTCATTGAATTATGTTGATGTGAGCATTCGCAACAGCACAGAGAGGAGGAATTTAGGGTTCTTCTCCTGTGGAACAGGAAACCCAATTGATGATTGTTGGCGATGCGACCCACGTTGGCAACTTCGCCGCAAGCACCTAGCAAATTGCGGCATTGGGTTCGGTCGCAACGCTGTCGGTGGCCGCGATGGGAGATACTATGTCGTTTCAGATCCTGGCGATGACGATCCTGTCAATCCCAGACCAGGAACTCTTCGCCATGCCGTGATTCAAGACAGGCCATTGTGGATTGTGTTCAAAAGAGATATGGTCATCACTCTAAAGCAAGAACTCATCATGAACAGCTTCAAAACAATCGATGGCCGTGGTGCTAATGTCCACATTGCTTATGGCGCTTGCATTACAATCCAATTCGTAACCAATGTCATTATTCATGGTCTGCATATTCATGACTGCAAGCCAACGGGTAACGCCATGGTTCGAAGCTCCCCTAGTCATTATGGATGGAGGACAATGGCGGATGGGGATGGGGTTTCTATTTTTGGGTCGAGTCATATTTGGATTGACCATAACTCTCTCTCTAGCTGTGCTGATGGGCTCATCGACGCTGTGATGGGATCAACTGCCATTACCATTTCTAACAATTACTTCACCCACCACAATGAGGTGATACTTTTGGGACACAGTGACTCATATGTAAGAGACAAGCAAATGCAAGTGACCATTGCTTATAACCATTTTGGTGAAGGTCTCATCCAAAGAATGCCAAGGTGTAGACATGGGTATTTCCATGTAGTAAACAATGACTACACTCATTGGGTAATGTATGCCATCGGTGGAAGCGCTGATCCCACCATTAATAGCCAAGGCAACAGATATCTTGCCCCTGCCAACCCTTTTGCCAAAGAGGTCACTAAGAGAGTTGATACGTGGAATGGTGAATGGAAGCACTGGAATTGGAGATCAGAGGGAGATCTTTTGCTAAATGGAGCCTATTTCACTCCATCAGGAGCTGGTGCAGCAGCCAGTTATGCAAGAGCCTCAAGCTTAGGAGCCAAATCCTCTTCCTTGGTGGGCACCATTACTTCATCTGCAGGTGCCCTTTCTTGTCGCAGGGGATACCGTTGTTAA 1164 47.08 MTPVSRKICIHHSLNYVDVSIRNSTERRNLGFFSCGTGNPIDDCWRCDPRWQLRRKHLANCGIGFGRNAVGGRDGRYYVVSDPGDDDPVNPRPGTLRHAVIQDRPLWIVFKRDMVITLKQELIMNSFKTIDGRGANVHIAYGACITIQFVTNVIIHGLHIHDCKPTGNAMVRSSPSHYGWRTMADGDGVSIFGSSHIWIDHNSLSSCADGLIDAVMGSTAITISNNYFTHHNEVILLGHSDSYVRDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWVMYAIGGSADPTINSQGNRYLAPANPFAKEVTKRVDTWNGEWKHWNWRSEGDLLLNGAYFTPSGAGAAASYARASSLGAKSSSLVGTITSSAGALSCRRGYRC 387
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 9460031 9461675 + Carg08918-RA Car02g01451 143937
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01451 387 Pfam Pectate lyase 121 302 IPR002022 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g01451 Car-Chr2:9460031 Car13g00617 Car-Chr13:7884129 0 dispersed
Car14g01674 Car-Chr14:13329725 Car02g01451 Car-Chr2:9460031 0 wgd
Car17g00103 Car-Chr17:607458 Car02g01451 Car-Chr2:9460031 0 wgd
Car19g00112 Car-Chr19:937841 Car02g01451 Car-Chr2:9460031 0 wgd
Car02g01451 Car-Chr2:9460031 Car06g01087 Car-Chr6:8171712 0 wgd
Car02g01451 Car-Chr2:9460031 Car08g00910 Car-Chr8:6115148 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01451 K01728 - csv:101207204 757.673