Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01468 ATGGATTTCAACTCCCAAATGCTTCTTCTTTCAACCCTTTTCCTCTGTTTTCTTTCACTTCAAGTTCAAGCAAACATTCCCACTCTTCAAACTTACATAATTCAACTCCATCCACAGGGATTAACCAGCTCTCCCTTTTATTCTAAGCGTCAATGGCATCTTTCTTTTCTTGAACAAACTCTATCTGCTGAAGAAGACTCTTCTTCTCGATTGCTTTACTCGTATTCTAATGCCATGGAAGGATTTGCAGCTCAGTTATCTGAAACTGAGATTGAGTATTTGAAGAAATTGCCTGATGTTGTGGCTGTGAGAGCTGATAGAAAATATGAAATTCAAACTACTTATTCTCCTAAGTTCTTGGGGCTTAGTTTAGGCTCACAAGGTGTTTGGTTTAATTCCTCAATGGGCGAAGGAGCGATTGTTGGGGTTCTTGACACTGGAGTTTGGCCTGAGAGTCCAAGCTTTAGTGATTCCAGAATGCCCCCAATTCCTCAAAAATGGCGAGGGGCTTGCCAAGAAGGCCAAGATTTTAACTCCTCAAATTGTAACAGGAAACTCATTGGTGCCAAGTTCTTTATCAAAGGACACCATGTGGCTTCATCCCAGCCATCTGATGTTGATCAGGAGTATGTCTCCCCAAGAGACTCCCATGGCCATGGAACTCACACGTCTTCTACAGCTGCAGGAGCTTCGGTCGCTGAAGCGAGCGTGTTCGGTAATGGAGCTGGCGTGGCGCAAGGGATGGCCCCAAGAGCTCACATTGCGGTGTACAAAGTTTGCTGGTTCAGTGGCTGCTATAGCTCTGATATTGTAGCAGCCATGGATGCTGCAATAAGGGATGGTGTTGACATTCTTTCCCTTTCGCTCGGTGGCTTCCCGCTTCCATTTTTCGACGACAGTATCGCCATCGGAAGCTTTCGAGCAATGCAGCATGGCATCTCAGTCAACTGCGCAGCAGGAAACAATGGTCCAATTCAAAGCTCTGTTGCCAATGTAGCTCCTTGGATCACCACCATTGGTGCAAGCACACTCGACCGAAGATTCCCGGCTATCGTTCGACTAAGCAATGGGGAATTCATTTACGGCGAATCAATGTACCCTGGCAACAAGTTCAAGCATGCTACCAAAGAGCTTGAAGTGGTTTACTTGACTGGAGGACAAATGGGAGGTGAACTTTGCTTAAAAGGGTCTCTTCCAAGAGAACAAGTAGAAGGAAAAATCGTGCTCTGCGACCGTGGCGTCAATGGCAGATCCGAAAAGGGGCAGATTGTGAAGGAATCTGGAGGAGCTGCCATGATCCTTGCAAATACAGCGATAAATCTAGAGGAAGACTTGGTTGATGTTCATGTTTTACCGGCCACATTGATCGGATTTGCCGAGGCGAATCGGTTAAAAGCTTACATGAACACAACAAGCAATCCAAAAGCCAGAATCCAATTTGGAGGAACTGTGATAGGAAGATCAAGAGCTCCATCTGTTGCTCAATTTTCATCAAGAGGACCAAGCCTCACAAATCCTTCAACGCTCAAGCCTGATGTAATTGCTCCTGGGGTCAACATTATAGCAGCTTGGCCACAAAATCTTGGTCCAACTGGCCTTCCAGAAGATTCTAGAAGGTCAAACTTCACTGTCATGTCAGGAACATCCATGGCTTGTCCCCATGTCAGTGGAATTGCGGCTCTAATCCATTCAGCTCATCCAAAATGGACACCAGCAGCCATTAAATCAGCCATAATGACAACCGCTGAAGTTACTGATCATTATGGTAAGCCAATTCTTGATGGCAGCAAACCAGCTGGCGTTTTTGCAATGGGAGCTGGTCATATAAACCCAACCAAAGCAATTGATCCTGGTTTAGTTTATGATATAAAGCCATATGAATATGTCATTCATCTTTGTGCTCTTGGATACACTCATTCAGAAATCTTCATCATAACCCACATGAATGTGAGTTGCCATAAGGTTTTGCAGATGAACAAAGGCTTCAGCTTGAACTATCCTTCCATGTCCGTCGTTTTTAAGCACAAGACGATGAGTAAGGCAGTTTCGAGACGATTGACGAATGTGGGGAGCCCAAATTCCATCTACTCAGTGGAAGTAACGGCACCTAAAGGCGTTCAAGTTCGAGTCAAGCCTCGGCGCTTGGTGTTCAAATATGTTAACCAAAGTTTAAATTATAAGGTATGGTTTATGTCTGAGAAGGGAAAAGAAGGAAAAACAGTGAGCTCTTCAGAAGGGCATTTGACATGGGTTCATTCGGAGAATGGGAAATACAAAGTTAGAAGCCCAATTGTGGTGACTTGGAAGAATTAA 2313 44.66 MDFNSQMLLLSTLFLCFLSLQVQANIPTLQTYIIQLHPQGLTSSPFYSKRQWHLSFLEQTLSAEEDSSSRLLYSYSNAMEGFAAQLSETEIEYLKKLPDVVAVRADRKYEIQTTYSPKFLGLSLGSQGVWFNSSMGEGAIVGVLDTGVWPESPSFSDSRMPPIPQKWRGACQEGQDFNSSNCNRKLIGAKFFIKGHHVASSQPSDVDQEYVSPRDSHGHGTHTSSTAAGASVAEASVFGNGAGVAQGMAPRAHIAVYKVCWFSGCYSSDIVAAMDAAIRDGVDILSLSLGGFPLPFFDDSIAIGSFRAMQHGISVNCAAGNNGPIQSSVANVAPWITTIGASTLDRRFPAIVRLSNGEFIYGESMYPGNKFKHATKELEVVYLTGGQMGGELCLKGSLPREQVEGKIVLCDRGVNGRSEKGQIVKESGGAAMILANTAINLEEDLVDVHVLPATLIGFAEANRLKAYMNTTSNPKARIQFGGTVIGRSRAPSVAQFSSRGPSLTNPSTLKPDVIAPGVNIIAAWPQNLGPTGLPEDSRRSNFTVMSGTSMACPHVSGIAALIHSAHPKWTPAAIKSAIMTTAEVTDHYGKPILDGSKPAGVFAMGAGHINPTKAIDPGLVYDIKPYEYVIHLCALGYTHSEIFIITHMNVSCHKVLQMNKGFSLNYPSMSVVFKHKTMSKAVSRRLTNVGSPNSIYSVEVTAPKGVQVRVKPRRLVFKYVNQSLNYKVWFMSEKGKEGKTVSSSEGHLTWVHSENGKYKVRSPIVVTWKN 770
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 9579646 9581958 + Carg08936-RA Car02g01468 143954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01468 770 Pfam PA domain 399 464 IPR003137 -
Car02g01468 770 Pfam Subtilase family 136 586 IPR000209 GO:0006508|GO:0008236
Car02g01468 770 ProSitePatterns Serine proteases, subtilase family, serine active site. 547 557 IPR023828 -
Car02g01468 770 Pfam Fibronectin type-III domain 664 766 IPR041469 -
Car02g01468 770 Pfam Peptidase inhibitor I9 31 111 IPR010259 -
Car02g01468 770 MobiDBLite consensus disorder prediction 203 226 - -
Car02g01468 770 ProSiteProfiles Serine proteases, subtilase domain profile. 114 615 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g01468 Car-Chr2:9579646 Car10g00692 Car-Chr10:3589429 0 dispersed
Car02g00624 Car-Chr2:4706959 Car02g01468 Car-Chr2:9579646 2.79E-156 transposed
Car19g00095 Car-Chr19:776790 Car02g01468 Car-Chr2:9579646 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01468 - - cmax:111490865 1522.68