Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01469 ATGGGTTCGGTGAAGAAGACGATGAAGTCGAAAACCCAGATTTTGTTTTGTGTGTTCTTGTACTGTTGGATTGGTTTTTGTACCGAGTGTTCTGCTGCTGCGTTTAGTGAAGAAGCTTTGACTTTGGTTTCGTTTAAATCAGGGCTTGTTGATCCGTTGAAGTGGCTTAGAGATTGGAAGCTGGGCGATGGAGATGGTAGATTTGCAGGGCACTGTAACTGGACTGGAGTTTCTTGCAACTCAGATGGAGCAGTTGAGAAACTGAGCCTTTCTCGTATGAATCTCAGCGGCATTTTGTCGAACGACTTGCCTGCACTAACAAGACTCAGTTCTCTTGACTTGAGTTGCAATGAATTCTCCTCTTCTTTGCCAAAATCTATTGGAAATCTCACTTCCTTGACGAGTTTTGATGTGAGTCAAAACTCTTTTGTTGGTGAGATTCCGGTGGGGTTTGGGGAGATGGTTGAATTGAAGAACTTCAATGCCTCAAGCAACAATTTCTCTGGTTTAATCCCTGAAGATCTTGGAAATGCAACTCAGCTGGAGATTTTGGATCTCCGTGGGAGTTTTCTTGAAGGTTCAATTCCTGTATCTTTCAAGAACTTGCAGAAGTTGAAGTTTCTTGGACTTTCTGGGAACAGTCTCACCGGTCGAATCCCGGCTGAGATCGGTCAGATGTCGTCGTTAGAGACGGTTATTATTGGATACAACAAGTTTGAAGGAGGGATTCCATCAGAATTTGGAAATCTCACCAATCTGAAGTATCTTGATTTGGCTGTCGGGAAACTTGGTGGTGGCATTCCGGCTGAGCTTGGGAGGCTTAAACAGCTTGAGACATTGTTCCTTTATAAGAACGAATTCAAGGATCGAATTCCATCGTCGATCGGCAATGCTACTTCATTAGTGTTTCTTGATCTTTCAGACAACAAATTGACAGGGGAAATCCCTGCTGAGGTTACTGAATTGAAGAACTTGCAGCTGCTGAATCTAATGTGTAACAAGCTGTCTGGTGAAGTACCTCCAGGGATTGGAGGGTTAACAAAATTACAGGTTCTAGAGCTATGGAACAACTCTTTTTCGGGCGAATTACCGGGCGATCTCGGTAAGAACTCGGAGTTGGTTTGGTTGGATGTCTCATCCAATTCATTCTCTGGTCCGATTCCTCCTTCGTTATGCAATTGGGGTAATCTAACCAAGCTTATCCTTTTCAACAATGCCTTTTCGGGTCCGATTCCGATTGGATTATCGTCGTGTTCATCGCTCGTTCGTGTTCGAATGCAGAACAATTTTGTATCTGGTACAATCCCAGTTGGTTTTGGGAAGCTTGGGAAGCTTGAAAGGCTAGAATTAGCAAATAATAGTCTGATTGGTAGCATCCCAAGTGATATGTCATCTTCTAAATCCCTTTCTTTTATTGATCTCTCTGAAAATAGCCTCCATTCTCCTCTTCCTTCCTCAATTCTTTCCATTCCAAATCTTCAAACCTTTATAGTCTCTGATAATCATTTAGAAGGTGAAATCCCAGACCAGTTCCAGGAGTGTCCTGCACTATCTGTTCTTGATCTCTCTTCAAACCATTTCACAGGCAGCATTCCGGAAAGCATTGCTTCATGTGAGAGATTGGTAGCTCTGAATCTCAGGAACAATCAGTTAACTGGAGAAATCCCAAAACAGATTGCAAATATGCCTTCATTGGCGGTTCTTGATCTATCCAACAACTCTCTTACAGGTAGAATACCGAATAATTTCGGTATCTCTCCCGCGCTTGAATCGTTTAATGTATCGTACAATAAGCTCGAGGGTCCAGTGCCATTAAATGGTGTGTTAAGAACAATCAATCCAAGTGATCTTCAGGGCAATGCTGGTTTATGTGGAGCTGTCCTACCTCCATGTTCACCAAATTCAGCATTCACATCAGGGCACAGGAACTCACGCTCGGCGCACATTATCGCCAGTTGGGTCATCGGAATATCGTCTGTTTTAGCAATATGTATCGCTATTTTCGGTGTTCGATCATTGTACAAGAGGTGGTACTCGACTGGAAGTTGCTTTGAAGGGCGATATGAAATGGGTGGCGGAGATTGGCCATGGAGATTGATGGCATTCCAAAGGCTTGGATTCACAAGTACTGATATTTTGGCTTGCATTAAGGAATCAAATGTGATTGGAATGGGAGCAACTGGGATTGTTTATAAAGCTGAAATGCCACAGATAAAGACAGCTGTGGCTGTAAAAAAGCTATGGAGATCAGAACCAGATCTTGAAATGGGAAGCAGTGAAGGTCTAGTAGGAGAAGTGAATTTATTGGGGAAGTTAAGGCACAGGAACATAGTTCGATTACTCGGGTTTATGCACAACGATGTCGATGTAATGATCGTCTACGAGTTTATGCAAAATGGAAGCCTTGGAGAAGCCTTGCATGGTAAACAAGCAGGGAGGCTGCTAGTAGACTGGGTTTCAAGGTACAACATAGCAATTGGAGTGGCACAGGGTTTAGCTTATCTCCACCATGATTGCGACCCACCCATCATTCATCGCGACGTTAAGCCAAACAATATACTTCTCGATTCAAATCTCGAAGCACGGTTAGCTGATTTCGGGTTGGCACGAATGATGGCTCGTAAGAACGAGACGGTTTCAATGGTAGCTGGATCGTATGGCTACATTGCCCCCGAATATGGATACACTTTAAAGGTGGATGAAAAGATCGACATTTACAGCTACGGCGTTGTTCTTTTGGAGCTGTTGACGGGAAAGAAGCCATTAGATTCTGAGTTCGGAGAATCGGTGGACATTGTTGAATGGATTAGAAGGAAGGTTAGAGACAACAGACGTTTAGAAGAAGCATTAGATCCAAATCTGGGAAATTTCAAGCATGTTCAAGAAGAAATGCTGTTTGTGCTTAGAATTGCTCTTCTCTGCACTGCAAAGCATCCAAAAGACAGGCCTTCCATGAGAGATATAATAACAATGCTTGGAGAAGCAAAACCAAGGAGAAAAAGCAACAGTAATGGCAATGAAGGATTTGGAACTAACAAAGACAAAGAGAAGCCAGTTTTCAACACCTCCCCAGTAAATGGCCTTCTCTAG 3090 43.14 MGSVKKTMKSKTQILFCVFLYCWIGFCTECSAAAFSEEALTLVSFKSGLVDPLKWLRDWKLGDGDGRFAGHCNWTGVSCNSDGAVEKLSLSRMNLSGILSNDLPALTRLSSLDLSCNEFSSSLPKSIGNLTSLTSFDVSQNSFVGEIPVGFGEMVELKNFNASSNNFSGLIPEDLGNATQLEILDLRGSFLEGSIPVSFKNLQKLKFLGLSGNSLTGRIPAEIGQMSSLETVIIGYNKFEGGIPSEFGNLTNLKYLDLAVGKLGGGIPAELGRLKQLETLFLYKNEFKDRIPSSIGNATSLVFLDLSDNKLTGEIPAEVTELKNLQLLNLMCNKLSGEVPPGIGGLTKLQVLELWNNSFSGELPGDLGKNSELVWLDVSSNSFSGPIPPSLCNWGNLTKLILFNNAFSGPIPIGLSSCSSLVRVRMQNNFVSGTIPVGFGKLGKLERLELANNSLIGSIPSDMSSSKSLSFIDLSENSLHSPLPSSILSIPNLQTFIVSDNHLEGEIPDQFQECPALSVLDLSSNHFTGSIPESIASCERLVALNLRNNQLTGEIPKQIANMPSLAVLDLSNNSLTGRIPNNFGISPALESFNVSYNKLEGPVPLNGVLRTINPSDLQGNAGLCGAVLPPCSPNSAFTSGHRNSRSAHIIASWVIGISSVLAICIAIFGVRSLYKRWYSTGSCFEGRYEMGGGDWPWRLMAFQRLGFTSTDILACIKESNVIGMGATGIVYKAEMPQIKTAVAVKKLWRSEPDLEMGSSEGLVGEVNLLGKLRHRNIVRLLGFMHNDVDVMIVYEFMQNGSLGEALHGKQAGRLLVDWVSRYNIAIGVAQGLAYLHHDCDPPIIHRDVKPNNILLDSNLEARLADFGLARMMARKNETVSMVAGSYGYIAPEYGYTLKVDEKIDIYSYGVVLLELLTGKKPLDSEFGESVDIVEWIRRKVRDNRRLEEALDPNLGNFKHVQEEMLFVLRIALLCTAKHPKDRPSMRDIITMLGEAKPRRKSNSNGNEGFGTNKDKEKPVFNTSPVNGLL 1029
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 9585363 9589558 + Carg08937-RA Car02g01469 143955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01469 1029 ProSitePatterns Serine/Threonine protein kinases active-site signature. 843 855 IPR008271 GO:0004672|GO:0006468
Car02g01469 1029 Pfam Protein kinase domain 718 989 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g01469 1029 ProSitePatterns Protein kinases ATP-binding region signature. 722 746 IPR017441 GO:0005524
Car02g01469 1029 MobiDBLite consensus disorder prediction 993 1029 - -
Car02g01469 1029 ProSiteProfiles Protein kinase domain profile. 716 999 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g01469 1029 Pfam Leucine rich repeat 491 551 IPR001611 GO:0005515
Car02g01469 1029 Pfam Leucine Rich Repeat 180 202 IPR001611 GO:0005515
Car02g01469 1029 Pfam Leucine Rich Repeat 565 583 IPR001611 GO:0005515
Car02g01469 1029 Pfam Leucine rich repeat N-terminal domain 37 80 IPR013210 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g01469 Car-Chr2:9585363 Car04g00323 Car-Chr4:1801546 0 dispersed
Car04g01211 Car-Chr4:6963697 Car02g01469 Car-Chr2:9585363 9.00E-160 dispersed
Car10g00073 Car-Chr10:327999 Car02g01469 Car-Chr2:9585363 1.26E-08 dispersed
Car10g00745 Car-Chr10:3923987 Car02g01469 Car-Chr2:9585363 1.05E-71 dispersed
Car11g00053 Car-Chr11:300719 Car02g01469 Car-Chr2:9585363 1.68E-06 dispersed
Car14g01318 Car-Chr14:11167356 Car02g01469 Car-Chr2:9585363 5.77E-140 dispersed
Car15g00179 Car-Chr15:952707 Car02g01469 Car-Chr2:9585363 8.78E-133 dispersed
Car12g01141 Car-Chr12:11070824 Car02g01469 Car-Chr2:9585363 0 wgd
Car02g01469 Car-Chr2:9585363 Car05g01174 Car-Chr5:11170894 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88689 PF00069 Pkinase 2.70E-48 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01469 - - cpep:111794871 1997.25