Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01500 ATGGAATCCTATTACTTTTCGTTCTCCGATTCGGATTTCTCGACGGAATGTTCACTCGGATCACCGGAGGAATTGTCGTTTTCATGGAGCGATTTTTTCTCGATAAACAGTGTGCTAGAAAACTCACTCTCACTGCCGGATGAGTTTCTCGGCCATCAACCATCGGAATCGGAATTGAAGATTGCGGTGAAGGAAGAAATCGAAGTGAGTTCGATTGATTTGGAGAGGGAGAAAGAGAGAAAAACGACGGAGAAGAATTACAGAGGAGTGAGGCGGCGGCCATGGGGGAAGTACGCGGCGGAGATTAGGGATTCGACAAGGCATGGAGTTAGGGTTTGGCTTGGGACTTTCGATAGTGCCGAAGCCGCGGCTTTAGCTTACGATCAAGCGGCGTATTCGATGAGAGGAGCACTGGCGGTGCTGAATTTTCCGGTGGAAATGGTGAGGGAATCGCTGCAGGAGATTAAGTATGAATTGGAAGAAGGATTGTCACCAGTGGTGGCTTTGAAGAGAAAACACTCACTAAGAAGGAAGTCGGGGGCGGCGGAGACGAAGAAGATGAAGAAAAAGAAGAATGTAGTGATTTTGGAAGATTTGGGAACAGAGTATTTGGAGGAACTTTTGATGCTAAGTTCATGCGAGAGTAGTAGTAGTAGCAGTAGTATGAGTCCTTTCTGA 678 47.05 MESYYFSFSDSDFSTECSLGSPEELSFSWSDFFSINSVLENSLSLPDEFLGHQPSESELKIAVKEEIEVSSIDLEREKERKTTEKNYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAEAAALAYDQAAYSMRGALAVLNFPVEMVRESLQEIKYELEEGLSPVVALKRKHSLRRKSGAAETKKMKKKKNVVILEDLGTEYLEELLMLSSCESSSSSSSMSPF 225
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 9715850 9716527 - Carg08968-RA Car02g01500 143986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01500 225 Pfam AP2 domain 86 136 IPR001471 GO:0003700|GO:0006355
Car02g01500 225 ProSiteProfiles AP2/ERF domain profile. 86 144 IPR001471 GO:0003700|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car02g01500 Car08g00270 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g01500 Car-Chr2:9715850 Car03g01167 Car-Chr3:9295699 2.00E-31 dispersed
Car17g00147 Car-Chr17:921956 Car02g01500 Car-Chr2:9715850 4.09E-22 wgd
Car19g00066 Car-Chr19:572150 Car02g01500 Car-Chr2:9715850 1.73E-100 wgd
Car02g01500 Car-Chr2:9715850 Car06g01142 Car-Chr6:8477035 2.90E-21 wgd
Car02g01500 Car-Chr2:9715850 Car08g00961 Car-Chr8:6422238 1.56E-46 wgd
Car02g01500 Car-Chr2:9715850 Car08g00270 Car-Chr8:1688509 1.18E-54 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3073 PF00847 AP2 2.50E-14 CL0081 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01500 K14516 - csv:101220325 288.115