Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car02g01505 | ATGGCGTCTTCCACTACAGCCAATTCTCATGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCCCCTTGCGGAGCATGCAAGTTTCTGCGACGAAAGTGTGCGCCTGATTGCATCTTTGCTCCTTACTTTTGCTCTGAACAAAGCGCTGCCAGATTTGCCGCCATTCATAAGGTGTTTGGAGCCAGTAACGTGTCCAAGTTGCTCCTCCACGTCCCTGTTCCTCATCGCTGTGAGGCAGTTGTCAGTATTGCCTATGAAGCTCAAGCTCGCATTCGTGACCCTGTTTATGGCTGTGTTGCTCATCTTTTTGCTCTCCAACAACAGGTGGCGTACTTGCAAACACAGCTGATGCAAGCCAGGGCTCAACTTGCACAAACCCACATGGAGATTCAATGGACCGGAATCCCAAAGTTTCCAAATTATCAATCCCAAGTAACCAACTCTGCAGTTTCCCCACAGACCTCTCTGGAATCAGCTGCCAACAATGATGAAGCTCAATTTCAACAATTTCCTACAAAAATACCAGCTTCTTGTCATGCTGATGCTGATGTTGATGTTGATGTTGATGTTGGAGAGCTCCAAGCTTTAGCACTCAGAATGATGAGAAACTAA | 615 | 48.13 | MASSTTANSHASASASASASASPCGACKFLRRKCAPDCIFAPYFCSEQSAARFAAIHKVFGASNVSKLLLHVPVPHRCEAVVSIAYEAQARIRDPVYGCVAHLFALQQQVAYLQTQLMQARAQLAQTHMEIQWTGIPKFPNYQSQVTNSAVSPQTSLESAANNDEAQFQQFPTKIPASCHADADVDVDVDVGELQALALRMMRN | 204 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 9742642 | 9743331 | - | Carg08973-RA | Car02g01505 | 143991 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car02g01505 | 204 | Pfam | Lateral organ boundaries (LOB) domain | 23 | 120 | IPR004883 | - | |
Car02g01505 | 204 | ProSiteProfiles | LOB domain profile. | 22 | 124 | IPR004883 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car02g01505 | Car-Chr2:9742642 | Car19g00060 | Car-Chr19:522150 | 4.10E-86 | dispersed | |
Car02g01504 | Car-Chr2:9741088 | Car02g01505 | Car-Chr2:9742642 | 8.27E-51 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
3075 | PF03195 | LOB | 2.50E-36 | No_clan | Car | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car02g01505 | K13944 | - | csv:101214521 | 249.98 |