Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01505 ATGGCGTCTTCCACTACAGCCAATTCTCATGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCCCCTTGCGGAGCATGCAAGTTTCTGCGACGAAAGTGTGCGCCTGATTGCATCTTTGCTCCTTACTTTTGCTCTGAACAAAGCGCTGCCAGATTTGCCGCCATTCATAAGGTGTTTGGAGCCAGTAACGTGTCCAAGTTGCTCCTCCACGTCCCTGTTCCTCATCGCTGTGAGGCAGTTGTCAGTATTGCCTATGAAGCTCAAGCTCGCATTCGTGACCCTGTTTATGGCTGTGTTGCTCATCTTTTTGCTCTCCAACAACAGGTGGCGTACTTGCAAACACAGCTGATGCAAGCCAGGGCTCAACTTGCACAAACCCACATGGAGATTCAATGGACCGGAATCCCAAAGTTTCCAAATTATCAATCCCAAGTAACCAACTCTGCAGTTTCCCCACAGACCTCTCTGGAATCAGCTGCCAACAATGATGAAGCTCAATTTCAACAATTTCCTACAAAAATACCAGCTTCTTGTCATGCTGATGCTGATGTTGATGTTGATGTTGATGTTGGAGAGCTCCAAGCTTTAGCACTCAGAATGATGAGAAACTAA 615 48.13 MASSTTANSHASASASASASASPCGACKFLRRKCAPDCIFAPYFCSEQSAARFAAIHKVFGASNVSKLLLHVPVPHRCEAVVSIAYEAQARIRDPVYGCVAHLFALQQQVAYLQTQLMQARAQLAQTHMEIQWTGIPKFPNYQSQVTNSAVSPQTSLESAANNDEAQFQQFPTKIPASCHADADVDVDVDVGELQALALRMMRN 204
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 9742642 9743331 - Carg08973-RA Car02g01505 143991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01505 204 Pfam Lateral organ boundaries (LOB) domain 23 120 IPR004883 -
Car02g01505 204 ProSiteProfiles LOB domain profile. 22 124 IPR004883 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g01505 Car-Chr2:9742642 Car19g00060 Car-Chr19:522150 4.10E-86 dispersed
Car02g01504 Car-Chr2:9741088 Car02g01505 Car-Chr2:9742642 8.27E-51 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3075 PF03195 LOB 2.50E-36 No_clan Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01505 K13944 - csv:101214521 249.98