Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01517 ATGACATTAACGGTGGAAACTGGAGAAGCAGTTTCCAAGTTCAGAAAGGTGGTTTCTCTTTTGAATTCTGGGTTTGGTCATGCAAGACCCACAAGCCTCAACAACATTCCCTCTCTCCCTCTGCCCCATAACGCTCTCTTGGATTCCCCAATTAACACAACGCATCCTCCAACCAAAACTCTTCACCCTTTTCACCCTCCTTTCAACACTCAAGTTTCTATTTTTCTGGGAAACCCAGATTTGGGATTGCCTCACAATCACATCCAAACCCCCAAACAACCTCCATCTTTAAGCTTCAGCTTCCCACGACGACGACGACGACAACAACAACAGAAACAGAGGATGTTGGCCCATCACAAACAGACGAATCTCAATTTTGAAAACTCCAATTGCTCCTTCACAATGTCATCACCAACGTCTTTCATTTCATCACTCAGTATGGACGAAGGGAGCTTCCAATGTGGAACCACTGCCAAATGCCATTGCTCAAACAAGAGATTATTTGTCTGTTGCAGCCACAATTTTTTGTTTATTTTGCGTAGTTCTTGTAGGAAACATAGAGTGAAGAGATCAATCAAGGTGCCCGCCATAAGCAACAAGCTCGCTGATATCCCTTCCGATGAGTATTCATGGAGGAAATACGGGCAGAAGCCGATTAAGGGCTCTCCTCATCCAAGGGGTTACTACAAATGCAGCAGCATGAGAGGTTGTCCCGCGAGGAAGCACGTGGACCGGTGCTTACAACAGCCATCCATGCTTATTGTAACCTACGAAGGAGAACACAATCACCCCACCATGTCTGCCCACACTCACCCTACGAACCTGCTCTCAAATTAA 837 46.0 MTLTVETGEAVSKFRKVVSLLNSGFGHARPTSLNNIPSLPLPHNALLDSPINTTHPPTKTLHPFHPPFNTQVSIFLGNPDLGLPHNHIQTPKQPPSLSFSFPRRRRRQQQQKQRMLAHHKQTNLNFENSNCSFTMSSPTSFISSLSMDEGSFQCGTTAKCHCSNKRLFVCCSHNFLFILRSSCRKHRVKRSIKVPAISNKLADIPSDEYSWRKYGQKPIKGSPHPRGYYKCSSMRGCPARKHVDRCLQQPSMLIVTYEGEHNHPTMSAHTHPTNLLSN 278
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 9786948 9787854 - Carg08985-RA Car02g01517 144003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01517 278 Pfam WRKY DNA -binding domain 207 264 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car02g01517 278 ProSiteProfiles WRKY domain profile. 200 266 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car02g01517 278 MobiDBLite consensus disorder prediction 91 112 - -
Car02g01517 278 Pfam Plant zinc cluster domain 183 203 IPR018872 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car02g01517 Car08g00285 CCT
Car02g01517 Car19g00051 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g01517 Car-Chr2:9786948 Car01g01421 Car-Chr1:12282329 8.72E-51 dispersed
Car17g01151 Car-Chr17:8826624 Car02g01517 Car-Chr2:9786948 7.14E-69 wgd
Car19g00051 Car-Chr19:341369 Car02g01517 Car-Chr2:9786948 7.44E-100 wgd
Car02g01517 Car-Chr2:9786948 Car08g00285 Car-Chr8:1797830 1.68E-71 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3078 PF03106 WRKY 6.50E-26 CL0274 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01517 - - cmos:111437274 488.419