Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car02g01531 | ATGGCTTTCCAGAAGATCGAACTAACCCAATTATATTCGATTCTTCTATGGTTTACTGTGTACGCGATAACGTACTGCTCTTCGGAATCGTCGACGTGCTTGATGGTGTACAAGGAAGGCGGCGCTCCCGCGGTATTTCAATCCCCGAAATGTCCTCTCTGGAAGCTCCCTGACTACACTTTTCAGTCTCCCAACGCCCCCCATTGTCAAATTGCAATGCATCAAGGTCGACGAAAGTATCAGGAGGATCGCACTCTCTGTGCTCTAGATATTCGAATTCCCTTCCCAAGTAGAACAGGTATTATGGAGGTCCCTGTGGGAATCATAGCAGTTTTTGATGGTCATAATGGAGCTGAAGCTAGTGAGATGGCTTCAAAGATTTTGTTGGAGTATTTTGTGGTGCATACTTATTTTCTTCTTGATGCCACTTATTCTGGAATTTTCAAGAGACCCATTAACTCATTTTCAAATGAGAAGGAACATGGTACCAAGTTTAATGAGTTCAATTGGAATGAGGAAATTAGTAACCGTGATCGGGAACTTGGAAGGCGTAAATACCTACTTCCAGCAGATTTTGCTGATGACTACCATTTGGAAATTTTGAAAGAAGCACTGTTGAGAGCGATACAAGACATTGATAAAACGTTTTCCAAGGAAGCACATAAAAATAATCTGGTTTCGGGTTCTACTGCTACTGTTATATTATTGGCAGATGCACAAATTTTGGTTGCAAACATTGGTGACTCGAAGACTTTTTTGTGCTCTGAAAAATTTCAGTCACCTGCTGAGGCTAAAGCTACCTTTTTACGGTTATACAAGCAAAAAAGATATAGTGGTGCCTCACGTGCAAGGGGCTATGGAAATTCTAAACCAGACTCATTTGATGGGCTGACACATTTTTATGCCAAAGAATTGACTAGGGATCACCATCCAGATAGAGAGGATGAAAGATCTAGGGTGGAGATTGCTGGGGGTCACGTTGTTGATTGGGGTGGTGTACCTCGAGTAAATGGTCAGTTGGCTATAAGCAGAGCAATTGGTGATGTGTCTTTTAAAAGCTATGGAGTTATATCTGCACCAGAAGTGACTGACTGGCAACCTTTGTCTACCAACGATAGCTATTTGGTGGTTTCATCTGATGGAATTTTTGAGAAGTTGAGCTCACAAGATGTTTGTGACTTGTTGTGGGAAATACACAATGATCGTATGTCAATTTCCAAGCATTCTCCTTCATGCTCATACTCATTGGCGGAATGCATCGTTAGTACGGCCTTTGAAAGAGGCAGTATGGATAACATGGCTGCTATTGTGGTTCCTTTAAGATCTGCTATTTCTTCTCAGAGGTTTCAGGAGGGGAGGTTTGTTGTGCAGAGGGACTCAAGTTTTCCCATATCTGGAATAGAAAAGCTTATTAAAGAGCACTCAGCCAATAGCTTCTCTTCCAATGCTGTGCAATTGGAGCATTCTCATCCAGTCATGTCCAAGTTCAAGAGACTATTAGTTGAAGGAAGACACAATAAGCTGGGATGTTTTTATCTGTCTGAGAATCTGGATGAATACAAGGATTATGTGTTGAGGACTCAAACTGATGAAGAAGAATATTTATGTGATCTACCCCATGCTCTTCCAGAGTCCCTCAATCAGCCATATGGTGGATCTTTAAATGTGTACAATGACCAAAGCTTGTGCTTTCATCTTGGAGCTAAAGATCAGTGCTTTCATCCTGAAGGCTTTGCTAGTTTTATTGGTTTGCTTGAATCAATTCCTTTCCACGATCCTGGTTCAGATTATCAACTATTTGAGCATCCACCACCTATATTGAGGTATGTGTTAAAGAAAAGGTTTGGTCAGGGTTCCTATGGCGAAGTATGGCTGGCTTTTCATGGGAACTGCCAGGAAGCTTTTACTCCAGTAGGAGAGAATATTTATGATTCGTGCAACTCATCTTTTGGAGATGCCAATGCCAGAAATGGTAGATACTCTTCAAATAGTTCTCAAGCCTATGCTCTGGAGGATAACGTGTTCATCATGAAACGTGTAATGGTTGAAAGAGGTGCTGGAGTCTATTTGAGTGGCTTACGGGAGAAATATTTTGGTGAAATATTTTTTAATGCTTCTACGCGACTTGAAGATGTGTTATCGACTGGAACATCAAACTTTGTCTTTGAAAAGTCACCATGGGGATCTAAAGACTTATTGGTAAAGGATGAATCCCTGAGTTATAAATTAGGGGAAACTAGGCAGTTTAAAAATGCTTTCCCGAATCAGTTTGGACCAAAGAGTGTTATGTATGAAGAAGGTTTAAACCATATTGTGAGATTTGTAGAATCTTTTGAATCCCGGTCTAACGAAATATGGCTTGTATTTCATTACGAAGGCATATCCCTCTCAAAGCTCATATATTCTATTGAAGATGCCGATGAGGAAAAAGTTGAACAAAAAAACCATGTTCAAATTTTACAACCTTCTAAGTGGTGGCATTGGTTGAAAACAACAGAAGCAGGACAAGAGGAAATGAAAAGTTTGATACGTCAGCTGTTGATGGCTCTCAAGTCTTGTCATGACCGCAATATCACTCACAGGGATATAAAACCTGAGAACATGGTGATATGCTTTGAAGATCAGGCTACTGGAAAATGCTTGAATGGAAGTCGAAGGGGGGATGAGAACTTCTCTACTAAAATGCGCATTATTGACTTTGGTAGTGCTATTGATGAATTCACAGTCAAGCATCTATATGGGTCTGCTGGGCCTTCCAGAGTGGAACAAACTTATGATTACACACCTCCTGAAGCCTTGCTTAATTCAAGTTGGTATCAGGAGATGTCAAGTGCAACTTTGAAGTATGACATGTGGAGCGTTGGTGTAGTGATGCTAGAATTGATCTTAGGATCACCTAATGTAGGTGATTTAACCCGAGTTCTTTTGGACCAGCATCTTGAGGGTTGGAATGAAGGCTTAAAGCAGCTAGCATACAAGCTTAGGTCGTTCATGGAGTTGTGCATTTTAATTCCTGGGAGTCCCTCAAAAAGTTATAAAAAAAATGTTCATCAAGGAGGTTCACCAGCATCCTGGAAATGCTCTGAAGAAGTTTTTGCCCACCAAATAAAGAGTAGAGATCCTCTTAAACTAGGATTGACAAATGTTATACAGAGATTAGTTATTTTCACCAAAAGTAAAGGTTATGTTGCTGACAATAGAAAATGCTCATGCATCAAATATCAGAAGCTTGATTGA | 3237 | 40.47 | MAFQKIELTQLYSILLWFTVYAITYCSSESSTCLMVYKEGGAPAVFQSPKCPLWKLPDYTFQSPNAPHCQIAMHQGRRKYQEDRTLCALDIRIPFPSRTGIMEVPVGIIAVFDGHNGAEASEMASKILLEYFVVHTYFLLDATYSGIFKRPINSFSNEKEHGTKFNEFNWNEEISNRDRELGRRKYLLPADFADDYHLEILKEALLRAIQDIDKTFSKEAHKNNLVSGSTATVILLADAQILVANIGDSKTFLCSEKFQSPAEAKATFLRLYKQKRYSGASRARGYGNSKPDSFDGLTHFYAKELTRDHHPDREDERSRVEIAGGHVVDWGGVPRVNGQLAISRAIGDVSFKSYGVISAPEVTDWQPLSTNDSYLVVSSDGIFEKLSSQDVCDLLWEIHNDRMSISKHSPSCSYSLAECIVSTAFERGSMDNMAAIVVPLRSAISSQRFQEGRFVVQRDSSFPISGIEKLIKEHSANSFSSNAVQLEHSHPVMSKFKRLLVEGRHNKLGCFYLSENLDEYKDYVLRTQTDEEEYLCDLPHALPESLNQPYGGSLNVYNDQSLCFHLGAKDQCFHPEGFASFIGLLESIPFHDPGSDYQLFEHPPPILRYVLKKRFGQGSYGEVWLAFHGNCQEAFTPVGENIYDSCNSSFGDANARNGRYSSNSSQAYALEDNVFIMKRVMVERGAGVYLSGLREKYFGEIFFNASTRLEDVLSTGTSNFVFEKSPWGSKDLLVKDESLSYKLGETRQFKNAFPNQFGPKSVMYEEGLNHIVRFVESFESRSNEIWLVFHYEGISLSKLIYSIEDADEEKVEQKNHVQILQPSKWWHWLKTTEAGQEEMKSLIRQLLMALKSCHDRNITHRDIKPENMVICFEDQATGKCLNGSRRGDENFSTKMRIIDFGSAIDEFTVKHLYGSAGPSRVEQTYDYTPPEALLNSSWYQEMSSATLKYDMWSVGVVMLELILGSPNVGDLTRVLLDQHLEGWNEGLKQLAYKLRSFMELCILIPGSPSKSYKKNVHQGGSPASWKCSEEVFAHQIKSRDPLKLGLTNVIQRLVIFTKSKGYVADNRKCSCIKYQKLD | 1078 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 9839668 | 9861905 | + | Carg08999-RA | Car02g01531 | 144017 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car02g01531 | 1078 | SUPERFAMILY | Protein kinase-like (PK-like) | 767 | 1001 | IPR011009 | - | |
Car02g01531 | 1078 | PANTHER | PROTEIN PHOSPHATASE 2C 50-RELATED | 20 | 597 | - | - | |
Car02g01531 | 1078 | CDD | PP2Cc | 75 | 440 | IPR001932 | - | |
Car02g01531 | 1078 | Gene3D | - | 61 | 447 | IPR036457 | - | |
Car02g01531 | 1078 | Gene3D | Transferase(Phosphotransferase) domain 1 | 766 | 1053 | - | - | |
Car02g01531 | 1078 | ProSiteProfiles | Protein kinase domain profile. | 609 | 1032 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Car02g01531 | 1078 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 858 | 870 | IPR008271 | GO:0004672|GO:0006468 | |
Car02g01531 | 1078 | PANTHER | ALPHABET, ISOFORM E-RELATED | 20 | 597 | - | - | |
Car02g01531 | 1078 | Pfam | Protein kinase domain | 769 | 967 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Car02g01531 | 1078 | SMART | PP2C_4 | 62 | 438 | IPR001932 | - | |
Car02g01531 | 1078 | SUPERFAMILY | PP2C-like | 63 | 441 | IPR036457 | - | |
Car02g01531 | 1078 | SMART | serkin_6 | 609 | 1063 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Car02g01531 | 1078 | ProSiteProfiles | PPM-type phosphatase domain profile. | 68 | 440 | IPR001932 | - | |
Car02g01531 | 1078 | Pfam | Protein phosphatase 2C | 201 | 433 | IPR001932 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car02g01531 | Car-Chr2:9839668 | Car05g00358 | Car-Chr5:2072008 | 9.12E-21 | dispersed | |
Car02g01531 | Car-Chr2:9839668 | Car12g00601 | Car-Chr12:3966077 | 2.54E-21 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
88691 | PF00481 | PP2C | 1.20E-36 | CL0238 | Car | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car02g01531 | - | - | csv:101210198 | 1843.55 |