Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01531 ATGGCTTTCCAGAAGATCGAACTAACCCAATTATATTCGATTCTTCTATGGTTTACTGTGTACGCGATAACGTACTGCTCTTCGGAATCGTCGACGTGCTTGATGGTGTACAAGGAAGGCGGCGCTCCCGCGGTATTTCAATCCCCGAAATGTCCTCTCTGGAAGCTCCCTGACTACACTTTTCAGTCTCCCAACGCCCCCCATTGTCAAATTGCAATGCATCAAGGTCGACGAAAGTATCAGGAGGATCGCACTCTCTGTGCTCTAGATATTCGAATTCCCTTCCCAAGTAGAACAGGTATTATGGAGGTCCCTGTGGGAATCATAGCAGTTTTTGATGGTCATAATGGAGCTGAAGCTAGTGAGATGGCTTCAAAGATTTTGTTGGAGTATTTTGTGGTGCATACTTATTTTCTTCTTGATGCCACTTATTCTGGAATTTTCAAGAGACCCATTAACTCATTTTCAAATGAGAAGGAACATGGTACCAAGTTTAATGAGTTCAATTGGAATGAGGAAATTAGTAACCGTGATCGGGAACTTGGAAGGCGTAAATACCTACTTCCAGCAGATTTTGCTGATGACTACCATTTGGAAATTTTGAAAGAAGCACTGTTGAGAGCGATACAAGACATTGATAAAACGTTTTCCAAGGAAGCACATAAAAATAATCTGGTTTCGGGTTCTACTGCTACTGTTATATTATTGGCAGATGCACAAATTTTGGTTGCAAACATTGGTGACTCGAAGACTTTTTTGTGCTCTGAAAAATTTCAGTCACCTGCTGAGGCTAAAGCTACCTTTTTACGGTTATACAAGCAAAAAAGATATAGTGGTGCCTCACGTGCAAGGGGCTATGGAAATTCTAAACCAGACTCATTTGATGGGCTGACACATTTTTATGCCAAAGAATTGACTAGGGATCACCATCCAGATAGAGAGGATGAAAGATCTAGGGTGGAGATTGCTGGGGGTCACGTTGTTGATTGGGGTGGTGTACCTCGAGTAAATGGTCAGTTGGCTATAAGCAGAGCAATTGGTGATGTGTCTTTTAAAAGCTATGGAGTTATATCTGCACCAGAAGTGACTGACTGGCAACCTTTGTCTACCAACGATAGCTATTTGGTGGTTTCATCTGATGGAATTTTTGAGAAGTTGAGCTCACAAGATGTTTGTGACTTGTTGTGGGAAATACACAATGATCGTATGTCAATTTCCAAGCATTCTCCTTCATGCTCATACTCATTGGCGGAATGCATCGTTAGTACGGCCTTTGAAAGAGGCAGTATGGATAACATGGCTGCTATTGTGGTTCCTTTAAGATCTGCTATTTCTTCTCAGAGGTTTCAGGAGGGGAGGTTTGTTGTGCAGAGGGACTCAAGTTTTCCCATATCTGGAATAGAAAAGCTTATTAAAGAGCACTCAGCCAATAGCTTCTCTTCCAATGCTGTGCAATTGGAGCATTCTCATCCAGTCATGTCCAAGTTCAAGAGACTATTAGTTGAAGGAAGACACAATAAGCTGGGATGTTTTTATCTGTCTGAGAATCTGGATGAATACAAGGATTATGTGTTGAGGACTCAAACTGATGAAGAAGAATATTTATGTGATCTACCCCATGCTCTTCCAGAGTCCCTCAATCAGCCATATGGTGGATCTTTAAATGTGTACAATGACCAAAGCTTGTGCTTTCATCTTGGAGCTAAAGATCAGTGCTTTCATCCTGAAGGCTTTGCTAGTTTTATTGGTTTGCTTGAATCAATTCCTTTCCACGATCCTGGTTCAGATTATCAACTATTTGAGCATCCACCACCTATATTGAGGTATGTGTTAAAGAAAAGGTTTGGTCAGGGTTCCTATGGCGAAGTATGGCTGGCTTTTCATGGGAACTGCCAGGAAGCTTTTACTCCAGTAGGAGAGAATATTTATGATTCGTGCAACTCATCTTTTGGAGATGCCAATGCCAGAAATGGTAGATACTCTTCAAATAGTTCTCAAGCCTATGCTCTGGAGGATAACGTGTTCATCATGAAACGTGTAATGGTTGAAAGAGGTGCTGGAGTCTATTTGAGTGGCTTACGGGAGAAATATTTTGGTGAAATATTTTTTAATGCTTCTACGCGACTTGAAGATGTGTTATCGACTGGAACATCAAACTTTGTCTTTGAAAAGTCACCATGGGGATCTAAAGACTTATTGGTAAAGGATGAATCCCTGAGTTATAAATTAGGGGAAACTAGGCAGTTTAAAAATGCTTTCCCGAATCAGTTTGGACCAAAGAGTGTTATGTATGAAGAAGGTTTAAACCATATTGTGAGATTTGTAGAATCTTTTGAATCCCGGTCTAACGAAATATGGCTTGTATTTCATTACGAAGGCATATCCCTCTCAAAGCTCATATATTCTATTGAAGATGCCGATGAGGAAAAAGTTGAACAAAAAAACCATGTTCAAATTTTACAACCTTCTAAGTGGTGGCATTGGTTGAAAACAACAGAAGCAGGACAAGAGGAAATGAAAAGTTTGATACGTCAGCTGTTGATGGCTCTCAAGTCTTGTCATGACCGCAATATCACTCACAGGGATATAAAACCTGAGAACATGGTGATATGCTTTGAAGATCAGGCTACTGGAAAATGCTTGAATGGAAGTCGAAGGGGGGATGAGAACTTCTCTACTAAAATGCGCATTATTGACTTTGGTAGTGCTATTGATGAATTCACAGTCAAGCATCTATATGGGTCTGCTGGGCCTTCCAGAGTGGAACAAACTTATGATTACACACCTCCTGAAGCCTTGCTTAATTCAAGTTGGTATCAGGAGATGTCAAGTGCAACTTTGAAGTATGACATGTGGAGCGTTGGTGTAGTGATGCTAGAATTGATCTTAGGATCACCTAATGTAGGTGATTTAACCCGAGTTCTTTTGGACCAGCATCTTGAGGGTTGGAATGAAGGCTTAAAGCAGCTAGCATACAAGCTTAGGTCGTTCATGGAGTTGTGCATTTTAATTCCTGGGAGTCCCTCAAAAAGTTATAAAAAAAATGTTCATCAAGGAGGTTCACCAGCATCCTGGAAATGCTCTGAAGAAGTTTTTGCCCACCAAATAAAGAGTAGAGATCCTCTTAAACTAGGATTGACAAATGTTATACAGAGATTAGTTATTTTCACCAAAAGTAAAGGTTATGTTGCTGACAATAGAAAATGCTCATGCATCAAATATCAGAAGCTTGATTGA 3237 40.47 MAFQKIELTQLYSILLWFTVYAITYCSSESSTCLMVYKEGGAPAVFQSPKCPLWKLPDYTFQSPNAPHCQIAMHQGRRKYQEDRTLCALDIRIPFPSRTGIMEVPVGIIAVFDGHNGAEASEMASKILLEYFVVHTYFLLDATYSGIFKRPINSFSNEKEHGTKFNEFNWNEEISNRDRELGRRKYLLPADFADDYHLEILKEALLRAIQDIDKTFSKEAHKNNLVSGSTATVILLADAQILVANIGDSKTFLCSEKFQSPAEAKATFLRLYKQKRYSGASRARGYGNSKPDSFDGLTHFYAKELTRDHHPDREDERSRVEIAGGHVVDWGGVPRVNGQLAISRAIGDVSFKSYGVISAPEVTDWQPLSTNDSYLVVSSDGIFEKLSSQDVCDLLWEIHNDRMSISKHSPSCSYSLAECIVSTAFERGSMDNMAAIVVPLRSAISSQRFQEGRFVVQRDSSFPISGIEKLIKEHSANSFSSNAVQLEHSHPVMSKFKRLLVEGRHNKLGCFYLSENLDEYKDYVLRTQTDEEEYLCDLPHALPESLNQPYGGSLNVYNDQSLCFHLGAKDQCFHPEGFASFIGLLESIPFHDPGSDYQLFEHPPPILRYVLKKRFGQGSYGEVWLAFHGNCQEAFTPVGENIYDSCNSSFGDANARNGRYSSNSSQAYALEDNVFIMKRVMVERGAGVYLSGLREKYFGEIFFNASTRLEDVLSTGTSNFVFEKSPWGSKDLLVKDESLSYKLGETRQFKNAFPNQFGPKSVMYEEGLNHIVRFVESFESRSNEIWLVFHYEGISLSKLIYSIEDADEEKVEQKNHVQILQPSKWWHWLKTTEAGQEEMKSLIRQLLMALKSCHDRNITHRDIKPENMVICFEDQATGKCLNGSRRGDENFSTKMRIIDFGSAIDEFTVKHLYGSAGPSRVEQTYDYTPPEALLNSSWYQEMSSATLKYDMWSVGVVMLELILGSPNVGDLTRVLLDQHLEGWNEGLKQLAYKLRSFMELCILIPGSPSKSYKKNVHQGGSPASWKCSEEVFAHQIKSRDPLKLGLTNVIQRLVIFTKSKGYVADNRKCSCIKYQKLD 1078
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 9839668 9861905 + Carg08999-RA Car02g01531 144017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01531 1078 SUPERFAMILY Protein kinase-like (PK-like) 767 1001 IPR011009 -
Car02g01531 1078 PANTHER PROTEIN PHOSPHATASE 2C 50-RELATED 20 597 - -
Car02g01531 1078 CDD PP2Cc 75 440 IPR001932 -
Car02g01531 1078 Gene3D - 61 447 IPR036457 -
Car02g01531 1078 Gene3D Transferase(Phosphotransferase) domain 1 766 1053 - -
Car02g01531 1078 ProSiteProfiles Protein kinase domain profile. 609 1032 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g01531 1078 ProSitePatterns Serine/Threonine protein kinases active-site signature. 858 870 IPR008271 GO:0004672|GO:0006468
Car02g01531 1078 PANTHER ALPHABET, ISOFORM E-RELATED 20 597 - -
Car02g01531 1078 Pfam Protein kinase domain 769 967 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g01531 1078 SMART PP2C_4 62 438 IPR001932 -
Car02g01531 1078 SUPERFAMILY PP2C-like 63 441 IPR036457 -
Car02g01531 1078 SMART serkin_6 609 1063 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g01531 1078 ProSiteProfiles PPM-type phosphatase domain profile. 68 440 IPR001932 -
Car02g01531 1078 Pfam Protein phosphatase 2C 201 433 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g01531 Car-Chr2:9839668 Car05g00358 Car-Chr5:2072008 9.12E-21 dispersed
Car02g01531 Car-Chr2:9839668 Car12g00601 Car-Chr12:3966077 2.54E-21 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88691 PF00481 PP2C 1.20E-36 CL0238 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01531 - - csv:101210198 1843.55