Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00013 ATGTCGATGTCGATGTCGATGAATTTAGTTAGTATCATCGTGTTGGTGGGCGTTAGTGTAACATTTAGAGGCGTAAATGGGTTGAGTATGGGATATTACTTGATGAGCTGTCCGTTTGTGGATCCGATTGTGAAGAACACGGTGAATCGAGCTCTTCAAAATGATCCCACTTTGGCTGCATCTCTCATCCGAATGCATTTTCACGATTGTTTCGTTGATTTTCCTCCATCTCGTGGATGCGATGGTTCAGTGTTGATTGATTCGACACGAGACAACAGAGCAGAAAAGGATTCTCCCGCCAATGAAAGCTTACGAGGTTACGAGGTTATTGATGACATTAAGGAACAATTAGAAAACCAATGTCCTAGTGTTGTTTCTTGCGCCGACATTGTCGCCATGGCGGCCAGAGATGCCGTCTTTTGGGCGGGAGGTCCATTTTATGACATACCGAAGGGAAGGAAGGACGGAACGAGATCTAGAATCGAAGACACCGCCAATTTGCCTTCGCCTTTCTTCAATGCATCTCAGCTTATTAATTCCTTCGCCCGCCGTGGCTTTACTGCTCAGCAAATGGTCGCACTTTCGGGGGCACATACATTAGGAGTGGCACGATGCGTATCATTCAAAGACAGACTGGACGGCACCGACACTCTTCTGAGTCCCAACTTTGGGAGAACACTGTCAAGAACATGCAGCAATGGCGACAATGCAATACAAACATTCGACGGCACGGCTGACAGCTTCGACAACGTCTATTACAACGCGCTGTCGAGAGGAGCCGGGGTTTTGTTTTCGGACCAGACGTTGTTCGCTAGCCCGCGTACGAGGGGCATTGTCAATGCCTACGCCATGAACCAAGCCCTGTTCTTCTTGGACTTCCAACAGGCCATCATCAAAATGGGTATGCTTGATGTAAAGGAAGGTCGTTGGGGCCAAGTCCGCCGCAACTGCCGTAGGGTTAATTGA 966 48.45 MSMSMSMNLVSIIVLVGVSVTFRGVNGLSMGYYLMSCPFVDPIVKNTVNRALQNDPTLAASLIRMHFHDCFVDFPPSRGCDGSVLIDSTRDNRAEKDSPANESLRGYEVIDDIKEQLENQCPSVVSCADIVAMAARDAVFWAGGPFYDIPKGRKDGTRSRIEDTANLPSPFFNASQLINSFARRGFTAQQMVALSGAHTLGVARCVSFKDRLDGTDTLLSPNFGRTLSRTCSNGDNAIQTFDGTADSFDNVYYNALSRGAGVLFSDQTLFASPRTRGIVNAYAMNQALFFLDFQQAIIKMGMLDVKEGRWGQVRRNCRRVN 321
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 161053 162425 - Carg26105-RA Car03g00013 144065
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00013 321 ProSiteProfiles Plant heme peroxidase family profile. 27 321 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car03g00013 321 Pfam Peroxidase 44 284 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car03g00013 321 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00013 Car-Chr3:161053 Car18g01118 Car-Chr18:11187680 2.11E-93 dispersed
Car03g00013 Car-Chr3:161053 Car07g00357 Car-Chr7:1801617 5.40E-90 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00013 K00430 - csv:101202852 553.132