Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00034 ATGGCGGATTACGATCTAACTCCACGAATTGCGCCGAATCTGGACCGCCATCTTGTTTTCCCTCTCCTTGAGTTTCTTCAAGAGAGGCAGCTTTACCCCGACGAGCAGATCCTCAAGGCCAAGATCGAACTTCTCAACAAAACCAACATGGTTGATTACGCCATGGACATCCATAAGTCGCTGTACCACACTGACGATGTTCCTCAAGATATGGTGGACAGGAGGGCGGAAGTCGTGGGGAGGCTTAAAGCTTTGGAGGAGTCTGCTGCGCCACTTGTTACTTTTCTGCAGAATCCTGCTGCTGTTCAGGAATTGAGGGCTGATAAGCAGTACAATCTTCAAATGCTTAATGATCGTTATCAGATTGGTCCAGATCAAATAGAAGCATTGTATCAATATGCCAAATTTCAGTTTGAGTGCGGGAACTACTCTGGTGCTGCTGACTATCTCTATCAGTACAGAGCTTTGTGCACAAACAGTGAAAGGAGCCTGAGTGCTCTATGGGGAAAATGGGCAGCTGAGATTTTAATGCAGAACTGGGATACTGCTGTTGAAGAGCTTAATCGTTTGAAGGAAATTATCGACTCTAAGAATTTCTCGTCGCATATGAATCAAGTGCAAAGCAGAATATGGTTGATGCATTGGAGCCTCTTCATTTTTTTCAATCATGACAATGGAAGAACACAGATAATTGACCTTTTTAATCAAGATAAGTATTTAAGTGCCATTCAAACCAATGCTCCCCATCTATTACGCTATTTGGCCACTGCATTCATCGTTAACAAAAGGCGGAGGCCACAGTTCAAAGATTTTATCAAGGTTATTCAGCAAGAACAGAATTCCTATAAGGATCCCATCACAGAGTTTTTGACTTGTGTCTATGTCAATTATGATTTTGATGGGGCACAAAAAAAGATGAGAGAGTGTGAAGAAGTTATATTGAATGACCCTTTCCTAGGAAAGAGGCTTGAAGAGGGAAACCTTTCTACCGTTCCTTTGAGGGACGAGTTCTTGGAAAATGCTCGCCTTTTCATCTTTGAGACTTACTGCAGAATACATCAGCGCATTGACATGAGTGTCCTTGCTGAGAAGTTGAACTTAAATTACGAGGAAGCGGAGCGGTGGATTGTTAATCTTGTTCGGACCTCAAAGCTTGATGCCAAGATTGATTCCAAGACGGGAACGGTTATAATGGAACCAAACCAGCCCAACGTATATGAAGAACTGATAGATCACACCAAATCATTATCTGGGCGTACCTACAAGTTAGTCACTCAACTACTAGAGCATGCACAGGCTCAGGCAACCAGATAA 1314 43.0 MADYDLTPRIAPNLDRHLVFPLLEFLQERQLYPDEQILKAKIELLNKTNMVDYAMDIHKSLYHTDDVPQDMVDRRAEVVGRLKALEESAAPLVTFLQNPAAVQELRADKQYNLQMLNDRYQIGPDQIEALYQYAKFQFECGNYSGAADYLYQYRALCTNSERSLSALWGKWAAEILMQNWDTAVEELNRLKEIIDSKNFSSHMNQVQSRIWLMHWSLFIFFNHDNGRTQIIDLFNQDKYLSAIQTNAPHLLRYLATAFIVNKRRRPQFKDFIKVIQQEQNSYKDPITEFLTCVYVNYDFDGAQKKMRECEEVILNDPFLGKRLEEGNLSTVPLRDEFLENARLFIFETYCRIHQRIDMSVLAEKLNLNYEEAERWIVNLVRTSKLDAKIDSKTGTVIMEPNQPNVYEELIDHTKSLSGRTYKLVTQLLEHAQAQATR 437
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 410259 413636 - Carg24996-RA Car03g00034 144086
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00034 437 SUPERFAMILY TPR-like 120 193 IPR011990 GO:0005515
Car03g00034 437 ProSiteProfiles PCI domain profile. 219 403 IPR000717 -
Car03g00034 437 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT E 1 435 IPR016650 GO:0003743|GO:0005737|GO:0005852
Car03g00034 437 SMART eIF3_N_2 5 137 IPR019010 -
Car03g00034 437 SUPERFAMILY Winged helix DNA-binding domain 333 404 IPR036390 -
Car03g00034 437 SMART PINT_4 332 416 IPR000717 -
Car03g00034 437 Pfam PCI domain 285 399 IPR000717 -
Car03g00034 437 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT E 1 435 - -
Car03g00034 437 Gene3D - 131 433 - -
Car03g00034 437 PIRSF Transl_init_eIF3e 1 437 IPR016650 GO:0003743|GO:0005737|GO:0005852
Car03g00034 437 Hamap Eukaryotic translation initiation factor 3 subunit E [EIF3E]. 2 429 IPR016650 GO:0003743|GO:0005737|GO:0005852
Car03g00034 437 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 332 416 - -
Car03g00034 437 Pfam eIF3 subunit 6 N terminal domain 5 137 IPR019010 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00034 Car-Chr3:410259 Car07g01293 Car-Chr7:8054421 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00034 K03250 - csv:101205199 858.596