Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00061 ATGGCCTTTTTGTGTTGTTATCTCTCCATTTTTCTTGGAATTCTTTTCAACTCCCAGTTTCTGGGAGCTGTTCTTGATGATGAAATCACCATGTCCGCCATTAGAGAGGAGCTTCAAGTTCTTGAGTGGAGCTCCAACATCTCTGAGTACTGTTCTTGGAAGGGTGTTCATTGTGGTTTGAATCATTCCATGGTTGAAGCTCTTGATCTTTCAGGTCATTCTCTTAGAGGTAATCCAACACTGATTTCTAAGCTCAAAGCTCTGAAATGGCTTGATCTATCCTACAATGACTTCCACGGCGACGTCCCGTCGAGTTTCGCAACCTTATCCGAGCTCGAATTCCTTGATTTGTCTTTGAATAAGTTTGATGGTTCGATCCCGCCCGAGTTTGGTGCTCTCAAGAACCTCAAATCATTGAACCTTTCCAATAATCTTCTTGTGGGAGAAATTCCTAATGAGCTTCAAGGATTAGAGAAATTGGAGGATTTTCAAGTTTCTAGCAATAGGTTGAATGGTTCAATTCCAAGTTGGGTTGGAAATTTGAGCCATCTAAGAGTTTTTACAGCTTATGAGAATGACTTTGTTGGTGTAATTCCTGATAATCTCGGTTCGGTTTCCGAGCTCCATGTGTTGAATCTTCATACCAATAGGCTTGAAGGCTCGATTCCTCGAAGTATTTTCGGTTCGGGGAAGCTTGAGATTTTGGTTCTTACACAAAACAGATTGACTGGCCAGCTTCCTGAAGAGATAGGTAACTGTAAAAGCCTTACGAGCGTTCGAATCGGGAACAATGATCTCGTTGGTTCGATACCTCCAGCCATTGGCAATGTCAGTAGCCTTGCTTACTTTGAAGTGGATAACAATCACCTTTCGGGCGACATTACGTCTCGGATTTCACGGTGCTCGAATCTCACTCTGCTGAATCTAGCATCGAACGAGTTCACCGGGGTGATTCCTCGTGAACTCGGAGAGCTGATGAATCTGCAGGAGCTTATTCTTTCCGGTAATAGCTTGTATGGCGACATTCCTAGATCGATGCTCCGGTGCAAGAATCTCAACAAGCTCGATTTAAGCAGCAATCGATTCAATGGTACTATTCCTTCAGATATCTGCAATATATCAAGATTGCAGTACTTACTTTTGGAACAGAACTCAATAAAAGGAGAGATACCTAAAGAGATTGGAAAATGTACAAAGCTTCTCGACTTACGACTCGGTAGTAACTACCTAACTGGAAGCGTCCCTTCCGAGATCGGTCGTATTAAGAACTTACAGATAGCTTTGAACTTGAGCTTCAATCATCTAACCGGACCGGTGCCTACGGAGTTGGGGGAACTTGATAAACTGGTTTCTTTAGATTTATCGAACAATCGTCTCTCGGGCGATATCCCCTATGAGCTTAAGGGCATGTTAAGCTTGATAGACGTGAATTTTTCGAATAATTTACTTACTGGTTCGATTCCTTTCTTTGTTCCATTCCAGAAAACTGCAAGTTCCAGTTTTCTGGGAAACAAAGGCCTTTGCGGGGCTCCATTAAGCGTTACGTGTAAAACTTCGATTGGTTCATACACTCGAGATTACCATCAAAAGGTCTCGTACAAGATCATACTAGCTGTCATCGGTTCCGGGCTGGCTGCTTTCGTATCGGTTAGTATAGTTGTTTTACTTTTTGTGATGAAAGAAAAGCAGGAAAAGGCAGGAAAGTCTTCAAGAGCTGTAGATGATGAAATCATCAAGGATCAACCGACCATAATAGCCGGGAATGTCTTTGACGATAATCTCCGACAGGAGCTAGATCTCGATGCGGTCGTGAAAGCGACGTTTAAGGATTCAAACAAGCTCATATTTGGGACTTTTAGTACTGTTTATAAGGCGGTCTTGCCTTCGGGGATGATCGTATCGGTTAAGAGACTAAAATCGATGGATAAGACGATCGTTCATCATCAAAGTAAGATGATCAGAGAGCTCGAAAGGCTTGGCAAACTGAGCCATGCTAATCTTATGCAACTCATTGGGTATGTTATATACCAAGACGTGGCTCTGTTGCTTCATCGTTACTTACCGAACGGGACATTGGCTCGGCTTCTTCACGAGTCTACGAAGCAACCTGAATACGAACCCGATTGGCCCACGAGATTTTTAATCGCCGTTGGAGCAGCCGAAGGGCTAGCTTTCCTTCATCATGTGGCTATAATCCATCTTGATATTTCATCATCCAATATTCTTTTGGATGCAAACTTCAAGCCTTTGGTTGGAGAGGTTGAGATATCAAAACTTTTAGATCCATCAAGAGGCACTGCTAGTATTAGTGCCATTGCAGGTTCATTTGGTTATATTCCACCAGAATATGCGTATACGATGCAAGTTACAGCCCCGGGAAACGTTTATAGCTACGGTGTCGTTTTGCTCGAGATCCTCACGACTAGAATGCCAGTGGATGAGGAGTTTGGTGAAGGAGTAGATTTGGTGAAGTGGGTGCTTAGTGCTCCTTCACGAGGCGAGACACCTGAACAGATACTCGATTCCCGGCTGAGCACGGTGTCGTTCGGGTGGAGGAAGGAGATGCTTGCAGCTCTCAAGATTGCATTGCTCTGCACTGATAGCGTACCAGCCAAAAGGCCAAAAATGAAGAAAGTGGTGGAAATGCTTATGGAGATCAAGCAAAATTGA 2670 43.6 MAFLCCYLSIFLGILFNSQFLGAVLDDEITMSAIREELQVLEWSSNISEYCSWKGVHCGLNHSMVEALDLSGHSLRGNPTLISKLKALKWLDLSYNDFHGDVPSSFATLSELEFLDLSLNKFDGSIPPEFGALKNLKSLNLSNNLLVGEIPNELQGLEKLEDFQVSSNRLNGSIPSWVGNLSHLRVFTAYENDFVGVIPDNLGSVSELHVLNLHTNRLEGSIPRSIFGSGKLEILVLTQNRLTGQLPEEIGNCKSLTSVRIGNNDLVGSIPPAIGNVSSLAYFEVDNNHLSGDITSRISRCSNLTLLNLASNEFTGVIPRELGELMNLQELILSGNSLYGDIPRSMLRCKNLNKLDLSSNRFNGTIPSDICNISRLQYLLLEQNSIKGEIPKEIGKCTKLLDLRLGSNYLTGSVPSEIGRIKNLQIALNLSFNHLTGPVPTELGELDKLVSLDLSNNRLSGDIPYELKGMLSLIDVNFSNNLLTGSIPFFVPFQKTASSSFLGNKGLCGAPLSVTCKTSIGSYTRDYHQKVSYKIILAVIGSGLAAFVSVSIVVLLFVMKEKQEKAGKSSRAVDDEIIKDQPTIIAGNVFDDNLRQELDLDAVVKATFKDSNKLIFGTFSTVYKAVLPSGMIVSVKRLKSMDKTIVHHQSKMIRELERLGKLSHANLMQLIGYVIYQDVALLLHRYLPNGTLARLLHESTKQPEYEPDWPTRFLIAVGAAEGLAFLHHVAIIHLDISSSNILLDANFKPLVGEVEISKLLDPSRGTASISAIAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRMPVDEEFGEGVDLVKWVLSAPSRGETPEQILDSRLSTVSFGWRKEMLAALKIALLCTDSVPAKRPKMKKVVEMLMEIKQN 889
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 790476 793937 + Carg22454-RA Car03g00061 144113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00061 889 Pfam Leucine rich repeat 279 338 IPR001611 GO:0005515
Car03g00061 889 ProSiteProfiles Protein kinase domain profile. 608 889 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g00061 889 Pfam Protein kinase domain 610 818 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g00061 889 ProSitePatterns Tyrosine protein kinases specific active-site signature. 731 743 IPR008266 GO:0004672|GO:0006468
Car03g00061 889 Pfam Leucine Rich Repeat 135 157 IPR001611 GO:0005515
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car03g00061 Car07g01271 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00836 Car-Chr1:6584716 Car03g00061 Car-Chr3:790476 1.51E-39 dispersed
Car03g00061 Car-Chr3:790476 Car06g01091 Car-Chr6:8200827 3.37E-62 dispersed
Car03g00061 Car-Chr3:790476 Car07g01271 Car-Chr7:7892897 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88694 PF00069 Pkinase 1.50E-27 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00061 - - csv:101215786 1546.56