Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00067 ATGGAGGTCGATCCAAATTCTGGGAAATCGTCGAAACAGATTGGGGGCGGCCAGGTTTGTCAGATCTGCAGCGATTCCGTCGGTACGACGGCTGACGGCGAGCCGTTTGTTGCGTGTGATGTTTGTGCGTTTCCGGTTTGCCGTCCCTGTTACGAGTACGAGAGGAAAGACGGGAATCAGTCTTGCCCTCAATGCAAGACCAAATACAAGTGGCATAAAGGAAGTCCTCCGGTTCATGGAGAGGCAGTGGAAGATGGTGATGGTAATGGAGCGGAAGGGGCGCAAGAAAGGCATCATAAGAAGCCAGAGCGCACGCTTAGCTGGGATACCAATTATGATAAGGAGGGATCGTTTAATCACATTCCTTTGCTCACCACTGGACGATCTGTTTCTGGAGAACTGTCTGCTGCATCTCCCGAGCGGCTCTCCATGGCATCGCCTGAAAGTGGGAGTCGCGCTAACTATAGAATCATGGATCAATCGAGAGACTCGGGATCGGCTAGGTTTGGCAATGTAGCCTGGAAAGAGAGGATAGATAGTTGGAAGGTGAAGCAGGACAAGAGTGTGCCGCCGATGAGTGTTAGTCATGCTCCTTCTGAAGGGAGGGGTGGTGCTGATTTTGATGCTAGCACTGATGTCATGATCGATGATTCTTTACTGAATGACGAAGCTCGTCAGCCTCTATCGAGGAAGGTTTCTATTCCGTCCTCTAGGATTAACCCTTATAGGATGGTCATAGTTCTGCGGCTTATTATTCTTTGCATCTTCTTGCACTACCGGATTACAAATCCAGTTCCGAATGCCTTTGCTCTGTGGTTAATATCAGTGATTTGTGAGATATGGTTTGCTGTATCTTGGATTTTGGATCAGTTCCCCAAATGGCTTCCAGTCAACCGGGAGACATATCTTGATAGGCTTGCTCTACGATATGATCGTGAAGGAGAGCCTTCTCAGTTGGCTGCTGTCGACATATTTGTCAGTACTGTCGACCCTCTGAAAGAACCTCCCCTCGTCACAGCCAATACGGTCCTATCGATTCTCTCTGTGGACTATCCAGTTGATAAGGTTTCTTGCTATGTATCAGATGATGGAGCTGCTATGTTAACATTTGAAGCCTTGTCTGAAACATCAGAATTTGCAAGAAAATGGGTTCCTTTCTCCAAGAAGTACAGCATTGAGCCACGAGCACCCGAGTGGTATTTTTCTCAGAAGATCGATTACTTAAAGGACAAGGTTCATCCATCATTCGTGAAGGATCGGAGAGCGATGAAGGTAGTAACTCCAGATTCCTCTATATCATTTTCTTTCATAAAAGTTACTTTATCATCTCCTGACCGTGCTTTTGTGTTACAGAGAGAATACGAGGAGTTTAAAATCCGTATCAATGGACTCGTTGCTAAGGCACAGAAAGTTCCTGATGAAGGGTGGGTCATGCAAGACGGTACGCCATGGCCGGGAAATAACACTAGAGATCATCCAGGAATGATACAGGTTTTCTTAGGCCACAGTGGAGGGCTCGATACTGAGGGTAACGAGCTTCCACGTCTGGTTTACGTTTCTCGTGAGAAGCGTCCTGGTTTCCAACATCACAAAAAGGCTGGTGCTATGAATGCTCTTGTTCGGGTATCTGCCGTGCTTACCAATGGACCCTTCTTGTTAAATCTTGATTGTGATCACTACATAAACAACAGTAAAGCGTTGCGGGAAGCTATGTGTTTTATGATGGATCCTAACCTTGGAAAATCAGTTTGCTATGTTCAGTTTCCACAGAGGTTCGATGGGATTGATAGAAATGATCGATATGCTAACCGAAACACCGTTTTCTTCGATATCAATCTTCGAGGCTTGGACGGTATTCAAGGTCCAGTTTATGTGGGAACGGGATGTGTTTTCAATCGAACTGCGTTGTATGGCTACGAACCCCCTCTCAAGCCCAAGCATAAAAAACCAGGGCTATTCTCGAGTTGCTTTGGGAAGTCGAAAAAGAAAAGTTCTAAATCAAAAAGAAAAGATTCTGATAAGAAGCAAACGAGTAAAAATGTCGATCCCACCGTGCCAATATTCAACCTCGAGGATATTGAGGAAGGAGTTGAAGGTGCCGGGTTTGATGACGAGAAGTCGTTGCTAATGTCGCAAATGAGCCTGGAGAAGAGGTTCGGTCAATCGGCTGTATTTGTTGCTTCCACGCTAATGGAGAATGGAGGCGTGCCGCAGTCTGCCACTCCGGAATCGCTCCTTAAAGAAGCAATTCATGTCATCAGTTGTGGATACGAGGATAAAACAGACTGGGGAAGTGAAATCGGATGGATCTACGGTTCGGTCACAGAAGATATTTTGACAGGGTTCAAGATGCACGCCCGTGGTTGGAGATCGATCTATTGCATACCGGACCGTCCTGCATTTAAAGGGTCTGCTCCCATTAATCTTTCTGACCGTCTTAACCAAGTGCTTCGGTGGGCGTTAGGTTCGGTCGAAATTCTTTTCAGTCGGCATTGTCCTATGTGGTACGGTTATGGTGGACGGTTGAAATGGCTCGAGCGATTTGCTTATGTTAACACTACCATTTACCCAATAACATCAATTCCTCTTCTTGCCTATTGTACCTTACCTGCAATATGTCTGCTCACTGGAAAGTTCATCATTCCTCAGATCAGTAATCTTGCCAGCATTTGGTTCATTTCTCTGTTTCTTTCCATCTTTGCTACTGGTATTCTGGAAATGAGATGGAGCGGTGTCGGGATCGATGAATGGTGGAGAAACGAGCAGTTCTGGGTTATCGGAGGTGTGTCGGCCCATCTGTTTGCCGTGTTCCAAGGTCTTCTTAAAGTTCTTGCTGGAATTGATACCAACTTCACGGTTACTTCAAAAGCATCTGATGAAGATGGAGATTTTGCTGAGCTCTACTTGTTCAAGTGGACAACTCTTCTCATTCCCCCAACTACTCTCCTGATTATCAACATAGTAGGAGTTGTTGCTGGAATTTCCTATGCCATTAACAGTGGCTATCAATCTTGGGGTCCCCTTTTCGGCAAGCTGTTCTTCGCGTTCTGGGTGATTATTCATCTCTATCCCTTCCTCAAGGGTCTGATGGGTCGCCAAAACCGAACTCCCACGATCGTGGTTGTCTGGTCCATCCTCCTTGCCTCAATCTTCTCCCTTTTATGGGTTCGGATCGATCCCTTCACAACTCGGGTAACTGGTCCTGACGTCGAACAATGTGGAATCAACTGCTAA 3234 46.26 MEVDPNSGKSSKQIGGGQVCQICSDSVGTTADGEPFVACDVCAFPVCRPCYEYERKDGNQSCPQCKTKYKWHKGSPPVHGEAVEDGDGNGAEGAQERHHKKPERTLSWDTNYDKEGSFNHIPLLTTGRSVSGELSAASPERLSMASPESGSRANYRIMDQSRDSGSARFGNVAWKERIDSWKVKQDKSVPPMSVSHAPSEGRGGADFDASTDVMIDDSLLNDEARQPLSRKVSIPSSRINPYRMVIVLRLIILCIFLHYRITNPVPNAFALWLISVICEIWFAVSWILDQFPKWLPVNRETYLDRLALRYDREGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILSVDYPVDKVSCYVSDDGAAMLTFEALSETSEFARKWVPFSKKYSIEPRAPEWYFSQKIDYLKDKVHPSFVKDRRAMKVVTPDSSISFSFIKVTLSSPDRAFVLQREYEEFKIRINGLVAKAQKVPDEGWVMQDGTPWPGNNTRDHPGMIQVFLGHSGGLDTEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMMDPNLGKSVCYVQFPQRFDGIDRNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPPLKPKHKKPGLFSSCFGKSKKKSSKSKRKDSDKKQTSKNVDPTVPIFNLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSATPESLLKEAIHVISCGYEDKTDWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCIPDRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPMWYGYGGRLKWLERFAYVNTTIYPITSIPLLAYCTLPAICLLTGKFIIPQISNLASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFAELYLFKWTTLLIPPTTLLIINIVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIIHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRIDPFTTRVTGPDVEQCGINC 1077
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 811642 817449 - Carg22460-RA Car03g00067 144119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00067 1077 MobiDBLite consensus disorder prediction 90 110 - -
Car03g00067 1077 Pfam Cellulose synthase 449 1070 IPR005150 GO:0016020|GO:0016760|GO:0030244
Car03g00067 1077 Pfam Cellulose synthase 322 424 IPR005150 GO:0016020|GO:0016760|GO:0030244
Car03g00067 1077 Pfam Zinc-binding RING-finger 16 86 IPR027934 -
Car03g00067 1077 MobiDBLite consensus disorder prediction 73 111 - -
Car03g00067 1077 ProSiteProfiles Zinc finger RING-type profile. 20 66 IPR001841 -
Car03g00067 1077 MobiDBLite consensus disorder prediction 650 682 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00067 Car-Chr3:811642 Car04g01268 Car-Chr4:7351698 0 dispersed
Car08g00439 Car-Chr8:2852979 Car03g00067 Car-Chr3:811642 0 transposed
Car03g00067 Car-Chr3:811642 Car07g01266 Car-Chr7:7873365 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00067 K10999 - csv:101211779 2076.6