Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00075 ATGCCCCCATTCCCCTCCTTCTTCCTCCTCACCTTCTTCTTCTCCTTCTCCCTTTCTCTTACTTCCTCTCTCAACTCCGACGGCCTCTCCCTCCTCGCCCTCAAAGCCGCCATTGAATCCGACCCATCTCACGTACTTGAGTCCTGGTCGGAGTTCGACTCCACCCCATGTCACTGGCCGGGAATCGTCTGCACTCGCGACCGTGTCACTCAGCTCTCCCTCCCCAACAAAGCCCTCACCGGCTACATCCCATCTGAAATCGGCCTCCTCGATTCCCTCCGCCGCCTCAACCTCGCATTCAACAATTTCTCTAAACCGATCCCTTCCCATCTCTTCAACGCCACGAATCTTGTCGTTCTTGACCTTTCCCACAACTCCCTCTCCGGTTTACTTTCCGATCAAATCGGTGATCTGAGGAAGCTTCGCCATCTCGATTTATCCTCTAATTTCCTCAATGGCTCTCTCCCTAATCGCCTCACTGAGTTAACAGAACTCGTCGGAACTCTCAATTTGTCCTACAATCGATTCTCCGGCGAGGTTCCGTCATCGTTTGGTAACCTCCCTTTGATTGTGAACCTCGATGTCCGTCACAATAATCTCACCGGGAAAATCCCTCAGGTGGGTTCGCTTTTGAATCAAGGTCCGACGGCGTTTTCCGACAACCCGAGTCTATGTGGGTTTCCGTTACAGACGCCATGTCCAGAAGCTCAGAACCCGAATGTTTTCCCGGAGAATCCACAGAATCCCAAGTCTGTAAACGGGAACTTCCCGGGGTACGGCGGCGGGAGAGAGAATGCCGGAGGTGGTGTCGCTGGGTCGGGTATGGTGGCGGTGGTTTCGTCGATATTCGCGGTGGTGGGGGTGGTGTCGCTGACGGTGTGGTGGTTCCGGAGAAAAGGTGTAGAGGGTAGGGCAGAGGAGGGCAAATCGGGAAAGGGGAGTCCGGAGAGGGAGAGTTTGGGGGAGTCGGAAGGGCAAGATGGTAAATTCGTAGTGATGGATGAAGGGATGAATTTGGAATTAGAGGATTTGTTGAGGGCATCGGCTTACGTGGTGGGGAAGAGTAGGAGTGGGATAGTGTACAAAGTAGTGGCGGGGCGGGGATCCAGTGCGGGCGCGAGTATTGTAGCTGTAAGGAGACTTATGATTTCATCAAGAATGGGAGCTTACACACCGCGCTACATGAATGTGAAAGGATCTCGAGATCTATACTTTCGAAGTCCGTCGAGTTCTTTGTCACCTCTGCCATGGTCTGCAAGGTTAAAAATTGCTCAAGGAGCTGCAAGGGGTTTGGCCTACATTCATGAATTCGGTGCCCGAAAATACGTACATGGAAACATAAAATCGACAAAAATCCTTCTCGACGATGATTTCGAGCCTTACATTTCAGGTTTTGGACTTAGTCGTCTCGGCCAAGGAGCACCTAAGTTCACTCCAACCTCCTCCAAGAAGTTGAGCTCAAACCAGAACATGATAAGCTCAATCATGGGGTCAAGCATTTCGAGTCCCTCGGCGATGTACTTGGCGCCAGAGGTTCGTGAGTTTGGAGGGAAGTACACGCAGAAATGCGACGTGTACTCGTTCGGGATTGTGATTCTTGAGCTTTTGAGCGGTAGATTGGCCGATGTCGTATCGGAAAATGATGGGAAGGGGTTGGAATGTTTCGTGAGAAAGGCGTTTCAAGAAGAGCGGCCATTGACTGATGTTATCGACCCTGCACTTGTGCCTGAGATTTATGCTAAGAAACAAGTAGTTTCGACGTTTCATATTGCACTGAATTGCACCGAGCTTGATCCCGAGCTGCGTCCGAGAATGAGAATGGTGTCGGAGTGTCTCGATCGAATTAAATATCAGTGA 1857 51.27 MPPFPSFFLLTFFFSFSLSLTSSLNSDGLSLLALKAAIESDPSHVLESWSEFDSTPCHWPGIVCTRDRVTQLSLPNKALTGYIPSEIGLLDSLRRLNLAFNNFSKPIPSHLFNATNLVVLDLSHNSLSGLLSDQIGDLRKLRHLDLSSNFLNGSLPNRLTELTELVGTLNLSYNRFSGEVPSSFGNLPLIVNLDVRHNNLTGKIPQVGSLLNQGPTAFSDNPSLCGFPLQTPCPEAQNPNVFPENPQNPKSVNGNFPGYGGGRENAGGGVAGSGMVAVVSSIFAVVGVVSLTVWWFRRKGVEGRAEEGKSGKGSPERESLGESEGQDGKFVVMDEGMNLELEDLLRASAYVVGKSRSGIVYKVVAGRGSSAGASIVAVRRLMISSRMGAYTPRYMNVKGSRDLYFRSPSSSLSPLPWSARLKIAQGAARGLAYIHEFGARKYVHGNIKSTKILLDDDFEPYISGFGLSRLGQGAPKFTPTSSKKLSSNQNMISSIMGSSISSPSAMYLAPEVREFGGKYTQKCDVYSFGIVILELLSGRLADVVSENDGKGLECFVRKAFQEERPLTDVIDPALVPEIYAKKQVVSTFHIALNCTELDPELRPRMRMVSECLDRIKYQ 618
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 957315 961570 - Carg22468-RA Car03g00075 144127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00075 618 MobiDBLite consensus disorder prediction 304 324 - -
Car03g00075 618 Pfam Protein kinase domain 422 541 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g00075 618 ProSiteProfiles Protein kinase domain profile. 296 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g00075 618 MobiDBLite consensus disorder prediction 304 327 - -
Car03g00075 618 Pfam Leucine rich repeat 92 149 IPR001611 GO:0005515
Car03g00075 618 Pfam Leucine rich repeat N-terminal domain 25 64 IPR013210 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00075 Car-Chr3:957315 Car04g01838 Car-Chr4:10650596 1.81E-144 dispersed
Car03g00075 Car-Chr3:957315 Car07g01258 Car-Chr7:7806626 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88696 PF00069 Pkinase 2.10E-11 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00075 - - cmax:111467172 1028.85