Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00082 ATGGCTTCCCTCTTGAAACCGCCAGTGTTGTTCTCATTAGTCTTTTCTTTCTTCATTTTGTGTTCTTCATCCTCTGAGGAATCGACCCTTTTGACCTTCAAAGCTTCCATTAACGATTCAACGAACTCTCTCTCGAATTGGGTTTCTTCTTCTGCAACCCATTTCTGTAATTGGACTGGAATTTCTTGTACGAGTTCTTCTCCTTCATCGCTTTCGATTGCCGCCATTGTTCTTCAGGGTTTGAACCTTTCCGGTGAAATTTCATCTTCCATTTGCGAACTCCCTCGTTTAACCCATCTTAATCTCGCTGATAATCGCTTCAATCAGCCGATTCCTCTTCATCTCTCGCAGTGCAGCGCGTTGGAGAGTTTGAATCTGAGTAATAATCTCATTTGGGGAACAATCCCAGATCAGATTTCTCTGTTTGATTCTCTACGTGTTCTTGATTTTGCGAGGAATCACATCGAAGGGAAGATCCCTGAAGGCATTGGGGCTTTGAAGAATCTTCAAACTCTTAATCTGAGGAACAACTTGATATCTGGTAGAGTACCCTCTGTTATCTTTCATAATCTTACTGAACTTGTTGTTCTTGATTTGTCTGAAAATGCTTATCTGATGAGTGATATTCCTAATGAGATTGGTAAGCTTGAGAAGCTTGAGGAGCTATGGCTTCAAAGCTCTGGTTTCTATGGCGAAATCCCTTATTCTTTGTTGGGTTTGAAGAGTTTGAATGTTTTGGATCTTTCTCAGAACAATCTCACTGGAAAACTCCCTGAAATGATGGGTTCTTCTTTGAAGAATTTGGTGTTCTTTGATGTTTCTGAGAATAAACTCACGGGGGCTTTCCCAAATGGGTTTTGTAGTGGAGAATCCCTTGTGAGTTTTAGTGTTCATACCAATTTTTTCACTGGGAATTTGCCTAATTCCTTGAATAAATGCTTGAATCTGGAGAGGTTTCAAGTTCAGAACAATGGGTTTTCAGGGGATTTCCCTGAATCCTTATGGTCATTGCCTAAGATTAAGCTAATTAGAGCTGAAAACAATGGTTTCTCTGGTGAAGTTCCTGAGTTCATATCAATGGCTACTCATCTTGAGCAAGTTCAGCTTGATAACAACAGTTTTTCGAGTAAGATACCCCAAGGTCTCGGATCGATTCGAAGCTTATATCGATTCTCTGCCTCGCTTAATCGTTTTCATGGTGATCTGCCACCGAACTTCTGTGATTCACCATTGATGAGTATTATTAATCTGTCTCATAATTCTCTTTCGGGTCGAATTCCCGAGCCGAAGAACTGCAAGAAACTTGTCTCATTGTCATTAGCAGGCAATGGTTTTAGTGGAGAGATACCTAGTTCCCTTGCAGATCTACCTGTGTTGACTTATCTTGATCTTTCTGATAACAATCTCACTGGCTCAATCCCTCAACGACTCGAGAACTTAAAGTTTGCGCTGTTTAATGTTTCGTTCAATCAACTATCGGGCGCTGTTCCGTTTTCTTTGATTTCTGGATTGCCAGCTTCTTTTCTGCAAGGAAATCCTGATCTTTGTGGCCCTGGTTTGCAAACTCCTTGTTCACAAGGCCATCCAGTAAGTGATATGTCTGGACTTAACAAAATGACATGTGCCCTTGTCTCTATAGCTTGTGTTCTCGGAGTTATGAGCTTAGCTGCTGGGTTCGTTCTGTATTACCGGTCGTTCAAATCGAAATCCCGTGTCGATAACTGGCATTCGGTCTACTTCTACCCTCTTAGAATCAGTGAGCACGCGTTGATCATGGGGATGAATGAGAAAACTGCACAAGGATGTGAGGGAGCTTTTGGACAAGTGTTTGTTTTAAGCTTACCGAGCCGTGAACTGATCGCCGTGAAGAAACTTGTTAAGTTCGGGAGTCGTTCGTGGAAGTCGTTGAAAGCCGAGGTCAAGACGTTGGCTAAGATCAGGCATAAGAACATCATCAAAATTCTGGGGTTTTGTCATTCTGATGATGCCATTTTTTTGATCTATGAATTCCTACATAAAGGAAGCTTGGCTGACTTGTTATGCAGAAATGATTCTTGTTTAAATTGGAATGTGAGACTAAGAATTGCTATTGAAGTTGCTCAAGGACTTGCTTACATTCACAAGGACTACGTCCCACGTTTGCTTCATCGAAATGTCAAATCGTCGAACATTCTACTGGACGTTGACTTGATCCCGAAGCTCACGGATTTTGCTCTCGACCATATCGTTGGAGAGTCGGCGTTTCACTCGATAGTTGCTTCGGAATCCGCTCATTCTTGCTATATTGCACCAGGCTCACAACTTCTTTGTTCGACATTTGAGAATTCTATTGGCATGGCTAAGTTAGGACATGACTCTGATACCATGTTAAGAATCACGGATCTCCACAATGAATGTAAATACAACAAAAAGGCGACAGAGCAAATGGATGTGTACAGCTTTGGAGTAGTGTTGCTAGAACTGGTGACTGGAAGACTAGCCGAGCGTTCGGAATCGACGGACGCTCTCGACGTGATCCAGTGGGTGAGGAGGAAGGTGAACATAGCGAATGGTGCTTCCCAAGTCCTTGACCCGAGCATCTCGGAGCATTCTCAACGAGGGTCGATGCTGGAAGCTCTAGACGTTGCCCTCCAATGCACTTCTATGATGCCTGAAAAACGACCGTCGATGCTGGAAGTCGCCAAGGCGCTTCAACTGATCGGCTCGACAACGAACCTTGATGATGCTGCTGCCTTCTCGGCTGCAGAGGATGATAGTTCGGTGTCGAGCTGA 2772 43.25 MASLLKPPVLFSLVFSFFILCSSSSEESTLLTFKASINDSTNSLSNWVSSSATHFCNWTGISCTSSSPSSLSIAAIVLQGLNLSGEISSSICELPRLTHLNLADNRFNQPIPLHLSQCSALESLNLSNNLIWGTIPDQISLFDSLRVLDFARNHIEGKIPEGIGALKNLQTLNLRNNLISGRVPSVIFHNLTELVVLDLSENAYLMSDIPNEIGKLEKLEELWLQSSGFYGEIPYSLLGLKSLNVLDLSQNNLTGKLPEMMGSSLKNLVFFDVSENKLTGAFPNGFCSGESLVSFSVHTNFFTGNLPNSLNKCLNLERFQVQNNGFSGDFPESLWSLPKIKLIRAENNGFSGEVPEFISMATHLEQVQLDNNSFSSKIPQGLGSIRSLYRFSASLNRFHGDLPPNFCDSPLMSIINLSHNSLSGRIPEPKNCKKLVSLSLAGNGFSGEIPSSLADLPVLTYLDLSDNNLTGSIPQRLENLKFALFNVSFNQLSGAVPFSLISGLPASFLQGNPDLCGPGLQTPCSQGHPVSDMSGLNKMTCALVSIACVLGVMSLAAGFVLYYRSFKSKSRVDNWHSVYFYPLRISEHALIMGMNEKTAQGCEGAFGQVFVLSLPSRELIAVKKLVKFGSRSWKSLKAEVKTLAKIRHKNIIKILGFCHSDDAIFLIYEFLHKGSLADLLCRNDSCLNWNVRLRIAIEVAQGLAYIHKDYVPRLLHRNVKSSNILLDVDLIPKLTDFALDHIVGESAFHSIVASESAHSCYIAPGSQLLCSTFENSIGMAKLGHDSDTMLRITDLHNECKYNKKATEQMDVYSFGVVLLELVTGRLAERSESTDALDVIQWVRRKVNIANGASQVLDPSISEHSQRGSMLEALDVALQCTSMMPEKRPSMLEVAKALQLIGSTTNLDDAAAFSAAEDDSSVSS 923
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 1047581 1051294 - Carg22475-RA Car03g00082 144134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00082 923 Pfam Leucine rich repeat 120 179 IPR001611 GO:0005515
Car03g00082 923 Pfam Leucine rich repeat N-terminal domain 25 63 IPR013210 -
Car03g00082 923 ProSiteProfiles Leucine-rich repeat profile. 458 481 IPR001611 GO:0005515
Car03g00082 923 Pfam Protein kinase domain 603 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g00082 923 ProSiteProfiles Protein kinase domain profile. 595 900 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00082 Car-Chr3:1047581 Car16g00765 Car-Chr16:4852458 1.50E-143 dispersed
Car03g00082 Car-Chr3:1047581 Car07g01251 Car-Chr7:7767423 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88697 PF00069 Pkinase 3.30E-25 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00082 - - csv:101222175 1464.51