Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00093 ATGGCCATGGCTCCAGGAAGCAGTACCTGCAAAGAAGTAGTTGATTCTCATCCTTCAGTTTCAGGGCATGACATAGCAATGTCTAAATCAGAGAATAATTCTACATCTTCAAAAGTTCTACTTGGTTCGAGTGGGAAGCTTGGAGTTTATTCAACCAATGGCGTGCAAGAACTGCTCGAGTGCCCTGTCTGCATGAATCTGATGTACCCTCCAATTTACCAGTGCCCGAATGGCCACACGTTGTGCTCAAACTGCAAGATCAGAGTTAGCAACTGCTGCCCGACCTGTCGTCATGAACTCGGAAACATAAGGTGCTTGGCATTGGAGAAGGTAGCTGAGTCGCTGGAAATCCCCTGCAGATACCAGAATTTGGGTTGCCAAGATATTTTTCCTTACTACAGTAAGCTTAAGCATGAGCAACACTGTCGATTCCGTCCTTACAACTGCCCTTATGCTGGATCGGAGTGTTCGGTCACGGGTGACATCCCGTCTCTTGTTGCACATCTCAAAGATGATCACAAGGTTGACATGCACGATGGGTGTACCTTCAATCATCGCTATGTGAAATCAAATCCGCACGAAGTTGAAAACGCCACATGGATGCTAACGGTTTTCAACTGCTTTGGAAGACAGTTCTGCTTGCATTTCGAGGCGTTCCAGCTAGGAACAGCGCCTGTTTACATGGCGTTCTTACGATTCATGGGCGAAGATAACGAAGCAAAGAAGTTCAGCTACAGTTTGGAAGTGGGTCACAACGGGCGTAAACTGATATGGCAAGGAATTCCGAGAGGCATCCGTGACAGTCACCGAAAAGTTCGTGACAGTCAAGACGGTCTCATCATTCAAAGAAACCTGGCACTGTATTTTTCGGGAGGAGAAAGACGAGAGCTGAAGCTGAGAATCACGGGTCGAATATGGAAAGAAGAATGA 930 46.88 MAMAPGSSTCKEVVDSHPSVSGHDIAMSKSENNSTSSKVLLGSSGKLGVYSTNGVQELLECPVCMNLMYPPIYQCPNGHTLCSNCKIRVSNCCPTCRHELGNIRCLALEKVAESLEIPCRYQNLGCQDIFPYYSKLKHEQHCRFRPYNCPYAGSECSVTGDIPSLVAHLKDDHKVDMHDGCTFNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGTAPVYMAFLRFMGEDNEAKKFSYSLEVGHNGRKLIWQGIPRGIRDSHRKVRDSQDGLIIQRNLALYFSGGERRELKLRITGRIWKEE 309
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 1197234 1198963 + Carg25726-RA Car03g00093 144145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00093 309 Pfam Seven in absentia protein family 103 302 IPR018121 GO:0005737|GO:0006511|GO:0007275
Car03g00093 309 ProSiteProfiles Zinc finger SIAH-type profile. 114 174 IPR013010 GO:0008270
Car03g00093 309 MobiDBLite consensus disorder prediction 23 37 - -
Car03g00093 309 ProSiteProfiles Zinc finger RING-type profile. 61 97 IPR001841 -
Car03g00093 309 MobiDBLite consensus disorder prediction 1 37 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00093 Car-Chr3:1197234 Car18g00793 Car-Chr18:9035299 6.94E-166 dispersed
Car03g00093 Car-Chr3:1197234 Car07g01244 Car-Chr7:7682102 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00093 K04506 - cpap:110811721 576.63