Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00095 ATGCAATTTGTAGTTGGACTGCCATTGTTTATCCGGTCAAATTCCGATCATAAATCCGACGGATCTGAGATGTTTAACAACTCATCAAAAGGGGAAACCGATTCACACGGCGGAGGAATGAACGTAAACGCATCAAATTTCGTAAAACACCCACCGGATTACCTGAGAAGAATCGATCAAATAGCAAAAACCGCCGCGAATTCCGGCAATCAGACGGCGACAGCAAACTCCGAGGGTTATTCAAAAACCCACTTCCGGTGCGACAGTTTGGAGGCGCCGGGAATGGTGATTAAGCCGCACACCGGCGGCGATGTGCGGTGGGACGCCATTAATATGGTGTCGAAAGGGGCGGCGTTGAATTTGAGCCATTTTCAGCTGTTGAAGAGGCTTGGTTATGGGGATATTGGGAGTGTTTATTTGGTGGAATTGAGAGGGACTGATACGTACTTTGCTATGAAAGTGATGGATAAGGTGTCTTTGGCTAGCCGGAATAAGGTGTTGAGGGCCCAAACGGAGAGGGAGATTTTGGGGCTTTTGGATCATCCTTTTTTGCCCACACTTTATTCTTATTTTGAAACTGATAAGTTTTATTGTTTGGTTATGGAGTTTTGTAGCGGTGGGAATCTTCATTCTCTTCGCCAAAAGCAACCTTACAAGTTCTATGCATCAGAGGTTCTATTAGCATTGGAATACCTTCACATGTTAGGCATAGTCTACAGAGATTTGAAACCCGAAAACCTCTTAATCCGAGACGAAGGCCACATCATGCTCTCCGATTTCGACCTCTCCCTCCGCTGCTCCGTCAGCCCGACCCTCGTCAAATCCTCCTCTGTCAACGTCAATGGCAGCTCCAACTCTGGCAGCAACGGCAGCAATGGCGGAGGCAGCGGTGGCATTCTCGACGACGAATCCGCTGTCCATGGCTGCATGCAACCTTCCAATTTCCTCCCTCGCATTCTCCCTTCCAAGAAGAATCGCAAGTCGAAATCCGACTTCGGCCTCTTCGTCGGTGGCTCCCTCCCCGAACTCATGGCCGAACCAACCAACGTTCGGTCCATGTCCTTCGTCGGTACACATGAGTATCTCGCACCGGAGATCATACAAGGGGAAGGTCACGGCAGCGCGGTCGACTGGTGGACATTTGGGATCTTCCTCTACGAGCTTCTTCATGGGACCACACCCTTCAAAGGGTCTGGAAATAGGGCCACGCTTTTCAACGTGGTGGAGCAGCCGCTTAGGTTCCCGGAGGCGCCGCAGGCCAGCCTAGCCGCTAGAGATCTCATCAGAGGGCTTCTGGTCAAGGAGCCGCAAAAGAGGATCGCTTATAGAAGAGGCGCCACTGAGATCAAGCAGCATCCCTTCTTTGATGGAGTGAATTGGGCGTTGGTGAGAAGCGCAATGCCGCCGCACGTGCCGGAGCCGGTGGATTTCAGCCAGTTTGCCAGAAAGAAGGGCGGCGGCGGAGTGCAGGAAGAGAAGAAGCCGGTGGCTGCTGGGAATTCTTCGCCGTCTACTGGTGGCGATCCCAATTATGTGGATTTTGAGTACTTCTAA 1554 51.35 MQFVVGLPLFIRSNSDHKSDGSEMFNNSSKGETDSHGGGMNVNASNFVKHPPDYLRRIDQIAKTAANSGNQTATANSEGYSKTHFRCDSLEAPGMVIKPHTGGDVRWDAINMVSKGAALNLSHFQLLKRLGYGDIGSVYLVELRGTDTYFAMKVMDKVSLASRNKVLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPYKFYASEVLLALEYLHMLGIVYRDLKPENLLIRDEGHIMLSDFDLSLRCSVSPTLVKSSSVNVNGSSNSGSNGSNGGGSGGILDDESAVHGCMQPSNFLPRILPSKKNRKSKSDFGLFVGGSLPELMAEPTNVRSMSFVGTHEYLAPEIIQGEGHGSAVDWWTFGIFLYELLHGTTPFKGSGNRATLFNVVEQPLRFPEAPQASLAARDLIRGLLVKEPQKRIAYRRGATEIKQHPFFDGVNWALVRSAMPPHVPEPVDFSQFARKKGGGGVQEEKKPVAAGNSSPSTGGDPNYVDFEYF 517
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 1208342 1217142 - Carg25728-RA Car03g00095 144147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00095 517 MobiDBLite consensus disorder prediction 481 512 - -
Car03g00095 517 Pfam Protein kinase domain 125 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g00095 517 Pfam Protein kinase domain 343 455 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g00095 517 MobiDBLite consensus disorder prediction 16 43 - -
Car03g00095 517 MobiDBLite consensus disorder prediction 278 295 - -
Car03g00095 517 MobiDBLite consensus disorder prediction 20 42 - -
Car03g00095 517 ProSitePatterns Serine/Threonine protein kinases active-site signature. 237 249 IPR008271 GO:0004672|GO:0006468
Car03g00095 517 ProSiteProfiles Protein kinase domain profile. 124 455 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g00095 517 MobiDBLite consensus disorder prediction 278 297 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00095 Car-Chr3:1208342 Car18g00579 Car-Chr18:6510796 0 dispersed
Car03g00095 Car-Chr3:1208342 Car07g01241 Car-Chr7:7661019 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88699 PF00069 Pkinase 2.20E-21 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00095 - - cmos:111435499 984.556