Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00188 ATGGCGACCAATTTCTGGTCCTTGGCATGTATTCGGAGTCAGAATAGCGCCGATCTAACGCCGCGCCCTCATTATCCGTCTATGCCGAAATATCCAGCTGGGGTTTCGTTGCTGGTGAATAGGTTTCCGGTGACTGAATCCACGGCGTTCTTCTCCGTCATCGGTATGACTTGCTCTGCTTGTGCTGGCTCTGTTGAGAAGGCGATCAAACGTCTCCCTGGGATTCGTGAAGCTGTTGTTGATGTTTTGAATGGCAAAGCTCGAGTCCAGTTTTACCCTAGCTTCGTTGATGCGGATCAAGTATGTGAGGCAATTAACGATGCAGGCTTTGAAGCAAGTATACTCAATGATGATATGATTGAAAGATGTCGAATTCGCGTAATTGGAATGACTTGTACATCTTGTTCCACAACTTTGGAATCTACATTACAAGCAATTCGTGGAGTTCAAAATGCTCAAGTAGCATTAGCCACGGAAGAGGCAGAAATTTGTTACAACCCAAGGATTTTGAACTACAATCAACTTCTCCAAGCCATTGAAGATTCTGGATTTGAAGCCTTACTTGTTAGCACAGAAGAAGATGTGAGCAAGATACAGCTCCAAGTCGATGGAGTGAGATCTGAGAATTCAATGAGATTGATTGGTAGCTCTCTGGAAGCACTTCCTGGAGTTCTAGGTATTGATATTGATCCTTCACTCAGCAAAATTTCCTTGTCTTATAAGCCAAATGTCACGGGACCTCGGAATATAATCCAAGTGATCGAATCAACTGGGTCGGGTCAAATTAAAGCAACAATATTTCCTGAAGAACAGGGCAGAGATGCCTATAAAAAGGAGGAAATTAAGCAATATTACAGATCATTCTTATGGAGTTTGATATTTACAATTCCAGTATTTTTAAGCTCCATGGTCTTCACTTATATACCTGGTATTAAGGATGGGTTGGATACCAAAATTGTCAATATGATGACTGTTGGAGAGCTTCTGAGGTGGGTGTTAGCAACTCCTGTACAGTTCATCATTGGAAGGCGATTCTATACTGGATCTTACAAAGCGTTGCGTCATGGATCTGCAAATATGGACGTTTTGATTGCTTTGGGCACAAATGCAGCATACTTTTATTCAGTGTACATGGTCTTAAGATCTGCAACCTCGAGTGATTTTAAAGCCACGGATTTCTTTGAAACTAGTTCCATGCTAATTTCATTCATTCTCCTCGGGAAATATCTCGAGGTCTTGGCGAAGGGAAAGACATCAGACGCTATTGCCAAGCTTATGAAGTTGGTGCCTGAAACAGCAACCTTGCTTACTTTTGATAATGATGGAAGGGTCATTAGGGAAGATGAAATTGATAGCCGATTGATACAAAAGAATGATGTAATTAAAGTCATTCCTGGTGCAAAGGTTGCTTCAGATGGAGTTGTTGTTTGGGGACAAAGTCATGTCAATGAAAGCATGATTACTGGGGAAGCCAAGCCAGTGGCGAAGAGACAGGATGATTCAGTGATTGGAGGCACCTTGAATGAGAACGGAGTGCTACATGTGAGGGCGACACACGTTGGATCTGAAAGTGCTCTTTCGCAGATTGTTCGTCTCGTCGAATCAGCTCAGATGGCGAAGGCTCCAGTTCAGAAAATTGCAGATCGTATCTCTAAGTTTTTTGTGCCAATGGTTATAGTACTTTCATTGACAACATGGCTCATCTGGTTTCTCACTGGGAAGTATGGTGGCTACCCAAGGACCTGGATACCTTCTTCCATGGATAGCTTTGAGCTTGCTCTGCAGTTTGGTATTTCAGTAATGGTCATAGCATGCCCTTGTGCTTTGGGCCTGGCAACTCCAACTGCTGTCATGGTTGGAACGGGAGTTGGTGCATCAAAAGGTGTTTTAATCAAAGGTGGCCAAGCATTGGAGAGCGCTCACAAGGTGAATTGCATTGTGTTTGACAAGACTGGAACTCTGACAGTCGGGAAGCCAGTTGTGGTGAACACTAAACTACTGAAAAATATGGCTCTGAAAGATTTCTATGAACTAGTCGCCGCCACTGAGGTAAACAGCGAGCATCCATTGGCTAAAGCCGTTGTTGAATATGCTAAAAAGTTCAAAGAAGAAGACGATAACCAAACTTGGCCTGAAGCACTAGACTTTATCTCCATTACTGGACATGGAGTTAAGGCCATCGTTCAAAACAAAGAAGTACTTGCAGGCAACAAGAGTCTCATGTTAGATCAGAACATCCTCATACCTGTTGAAGCTGAAGAAATATTAAAAGAAATCGAAGAACTGGCTCATACTGGAATTTTGGTATCCATTGATAGGAAATTGACAGGGGTTCTTGCCATATCTGATCCACTAAAACCGAGTGCTCGCGAGGTCATTTCGATACTCAAGGCCATGAAAGTTAAATCCATCATGGTTACAGGTGATAATTGGGGGACGGCGAAGTCCATAGCCAATGAGGTTGGGATTGATGATGTAATTGCAGAAGCTAAACCAGACCAGAAAGCAGATGAAGTGAAGAAATTACAGACTTTAGGTCATACGGTGGCAATGGTGGGAGATGGGATCAACGACTCACCGGCGCTTGTGGCTGCAGATGTTGGAATGGCAATTGGTGCAGGCACAGACATCGCCATTGAGGCAGCTGACATAGTTCTTATGAAAAGCAACTTGGAGGATGTCATAACAGCCATCGACCTTTCAAGGAAAACGTTTTCCAGGATCCGTCTGAACTACGTTTGGGCGCTCGGTTACAATCTCCTCGGTATCCCTATTGCAGCAGGAGTCCTATTCCCATCGACTCGATTTCGGTTACCGCCATGGATTGCAGGAGCAGCAATGGCTGCCTCTTCTGTTAGTGTTGTTTGCAGTTCTCTCCTCCTCAAGTATTACAAAAGACCCAAGAAGCTTGATGCCCTTGACATTCAAGGCATTAGAGTTGAGTGA 2946 43.79 MATNFWSLACIRSQNSADLTPRPHYPSMPKYPAGVSLLVNRFPVTESTAFFSVIGMTCSACAGSVEKAIKRLPGIREAVVDVLNGKARVQFYPSFVDADQVCEAINDAGFEASILNDDMIERCRIRVIGMTCTSCSTTLESTLQAIRGVQNAQVALATEEAEICYNPRILNYNQLLQAIEDSGFEALLVSTEEDVSKIQLQVDGVRSENSMRLIGSSLEALPGVLGIDIDPSLSKISLSYKPNVTGPRNIIQVIESTGSGQIKATIFPEEQGRDAYKKEEIKQYYRSFLWSLIFTIPVFLSSMVFTYIPGIKDGLDTKIVNMMTVGELLRWVLATPVQFIIGRRFYTGSYKALRHGSANMDVLIALGTNAAYFYSVYMVLRSATSSDFKATDFFETSSMLISFILLGKYLEVLAKGKTSDAIAKLMKLVPETATLLTFDNDGRVIREDEIDSRLIQKNDVIKVIPGAKVASDGVVVWGQSHVNESMITGEAKPVAKRQDDSVIGGTLNENGVLHVRATHVGSESALSQIVRLVESAQMAKAPVQKIADRISKFFVPMVIVLSLTTWLIWFLTGKYGGYPRTWIPSSMDSFELALQFGISVMVIACPCALGLATPTAVMVGTGVGASKGVLIKGGQALESAHKVNCIVFDKTGTLTVGKPVVVNTKLLKNMALKDFYELVAATEVNSEHPLAKAVVEYAKKFKEEDDNQTWPEALDFISITGHGVKAIVQNKEVLAGNKSLMLDQNILIPVEAEEILKEIEELAHTGILVSIDRKLTGVLAISDPLKPSAREVISILKAMKVKSIMVTGDNWGTAKSIANEVGIDDVIAEAKPDQKADEVKKLQTLGHTVAMVGDGINDSPALVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYVWALGYNLLGIPIAAGVLFPSTRFRLPPWIAGAAMAASSVSVVCSSLLLKYYKRPKKLDALDIQGIRVE 981
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 3161854 3167474 - Carg23683-RA Car03g00188 144240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00188 981 Pfam Heavy-metal-associated domain 51 110 IPR006121 GO:0046872
Car03g00188 981 Pfam Heavy-metal-associated domain 125 185 IPR006121 GO:0046872
Car03g00188 981 ProSitePatterns Heavy-metal-associated domain. 127 156 IPR017969 GO:0046872
Car03g00188 981 Pfam haloacid dehalogenase-like hydrolase 643 866 - -
Car03g00188 981 ProSiteProfiles Heavy-metal-associated domain profile. 197 258 IPR006121 GO:0046872
Car03g00188 981 ProSiteProfiles Heavy-metal-associated domain profile. 122 188 IPR006121 GO:0046872
Car03g00188 981 ProSitePatterns E1-E2 ATPases phosphorylation site. 649 655 IPR018303 -
Car03g00188 981 ProSitePatterns Heavy-metal-associated domain. 53 82 IPR017969 GO:0046872
Car03g00188 981 Pfam E1-E2 ATPase 428 626 - -
Car03g00188 981 ProSiteProfiles Heavy-metal-associated domain profile. 48 114 IPR006121 GO:0046872
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00188 Car-Chr3:3161854 Car07g00031 Car-Chr7:194862 2.74E-15 dispersed
Car02g01227 Car-Chr2:8306662 Car03g00188 Car-Chr3:3161854 0 transposed
Car15g00097 Car-Chr15:568053 Car03g00188 Car-Chr3:3161854 0 transposed
Car03g00188 Car-Chr3:3161854 Car07g01115 Car-Chr7:6658148 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00188 K17686 - csv:101218801 1751.1