Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00213 ATGATCGATGCTATTAAGGGTGCGATCGGCGATGCCGTTCTCACTTCCATGTGGATTTTCTGCGCTTCGTCTCTTGGAGTTCTTACCTCCGTCCTGTATTCGGTTGCTGGTGTTTATGGCATTCCGCTTCACCCGCTTTTTATCACTACTGCTCTCGTCTTCGTTCTTGTTTTCGTTTTTAATATAATTGGCGCTGCTTTGGGTGGGGCTAGCTTTAATCCCACTGCTACTGCCGCTTTCTATGCTGCTGGCGTTGGTCCGACCTCTCTCCTCTCCATGGCTCTCCGTTTCCCTGCTCAGGCAGCTGGTGCGGTTGCTGGTGCTGTGGCGATCAAGGAGGTGATGCCAATACAATACAAGCACATGCTTGGTGGACCTACTCTAAAAGTTGACATTCATTCTGGAGCCACAGCTGAAGGAGTTTTGACATTTCTAATCAGTTTTGCTGTTCTTCTAATTGTACTCAGAGGCCCCTCCAGTCCAGTTATTCAAACATGGTTGATGGCAGTGGCTACCGTAGCGTTAATCGTTGCTGGTTCCGATTACACAGGACCTTCCATGAATCCTGCAAATGCGTTTGGATGGGCATATCTAAACAACACGCACGATACATGGGAGCAGTTGTACGTGTACTGGATCGCCCCGTTCATAGGAGCCATTTTGGCTGCTTGGCTTTTCAGAATCATCTTCCCACCACCAGCCCCAGCCCCAGCCAAGCAGAAGAAAGCTTGA 732 49.45 MIDAIKGAIGDAVLTSMWIFCASSLGVLTSVLYSVAGVYGIPLHPLFITTALVFVLVFVFNIIGAALGGASFNPTATAAFYAAGVGPTSLLSMALRFPAQAAGAVAGAVAIKEVMPIQYKHMLGGPTLKVDIHSGATAEGVLTFLISFAVLLIVLRGPSSPVIQTWLMAVATVALIVAGSDYTGPSMNPANAFGWAYLNNTHDTWEQLYVYWIAPFIGAILAAWLFRIIFPPPAPAPAKQKKA 243
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 3441809 3445173 + Carg19558-RA Car03g00213 144265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00213 243 Pfam Major intrinsic protein 4 226 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car03g00213 Car06g00030 CCT
Car03g00213 Car07g01141 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00213 Car-Chr3:3441809 Car06g00030 Car-Chr6:249754 1.63E-36 dispersed
Car03g00213 Car-Chr3:3441809 Car07g01141 Car-Chr7:6855339 4.86E-141 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00213 K09875 - csv:101220534 410.994