Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00214 ATGCATAAACGTCCTGGGAAGCAACAATCGGAATCGTTGTCCAACAAGATCTATAGATTCAGAGGGGTGTTATTGCTCACCTCTCTTTCTCTTTTCCTTATCTTCTTTATTCTCTATTTCATGCCGGCTCGTGAGGATTACTCCTTCAACCACCGCAAAGTTTCCCCTGATCACAGGTCGTCTTCTTCTTCTAAGACCTCTTTTGCTGTAATTTTTGATGCTGGTAGCTCTGGGAGTCGCGTCCATGTCTTTTGCTTCGATCATAATCTCGATCTCCTCCCTGTTGGCAAGGACATCGAACTTTTCGAACAACTTAAACCAGGATTGAGTGCATATGCTGACAACCCCAAGAATGCTGCAGCATCTCTAATTTCCCTATTGGAAAAGGCAGAAAATGTTGTTCCAAAAAGGCTGCGGCAAATGACCCCTGTTAGAGTTGGGGCAACTGCAGGCTTGAGGGCCCTGAAAGGCGATACATCTGATAGAATTTTGCAGGCGGTTAAGGATCTCCTGCGAGACAAAAGTGACCTCAGGTTGGAGGGAAATGCTGTGTCTGTAATTGATGGAACTCAAGAAGGTTCTTATCTTTGGGTGACGTTAAACTATCTGCTTGGGAACTTGGGTAAGAAATATTCGGATACAGTTGGAGTTGTAGATCTTGGGGGAGGATCTGTTCAAATGGCATACGCTATCTCAGAAAAGGATGCTTCTCGGCTATCAACTGCAGAGGGCGTATACATCAAAAAGATGTATCTGAAGGGAGCAACTTATTATCTCTATGTTCACAGTTATTTGCATTATGGGTTACTCGCTGCTCGAGCAGAGGTTTTGAGTGTCTCGGAAGATTCTAGCAATGATTGCATCCTATCTGGCTACGAAGGAGCATACCATTACGGGGGAAAGGACTACACAGCATCGGCCTCTTCATCAGGCTCCAGCTTGAATGGATGCAGGAGGACAGTTTTGAAGGCCCTCAAGGTTAATGAATCCTCATGTACTCACATGAAGTGCACTTTTGGTGGCGTCTGGAATGGCGGAGGAGGAGACGGGCAGAAGAATCTCTTTGTTGCTTCGTTTTTCTTCGACAGGGCGGCTGAGGCTGGTTTTGCCGACCCCAATAAGCCCGTCGCTAAAGTTCGCCCTTCAGACTTCAACGATGCAGCAAAGCAAGCCTGCCAAATCAAAGTCGAAGACACCAGTACATATCCAAATGTCGAGAAGGATAACCTGCCGTACTTGTGTTTGGATCTTGTGTATCAGTACACACTACTCGTAGATGGATTCGGCTTGGATCCCTGGCAAGAGATCACATTGGTGAAGAAGGTTAAATACCAGAATTCCTTAGTTGAAGCAGCATGGCCTCTAGGCAGCGCCATCGAAGCTGTCTCGTCGTTAGCCTAA 1401 46.32 MHKRPGKQQSESLSNKIYRFRGVLLLTSLSLFLIFFILYFMPAREDYSFNHRKVSPDHRSSSSSKTSFAVIFDAGSSGSRVHVFCFDHNLDLLPVGKDIELFEQLKPGLSAYADNPKNAAASLISLLEKAENVVPKRLRQMTPVRVGATAGLRALKGDTSDRILQAVKDLLRDKSDLRLEGNAVSVIDGTQEGSYLWVTLNYLLGNLGKKYSDTVGVVDLGGGSVQMAYAISEKDASRLSTAEGVYIKKMYLKGATYYLYVHSYLHYGLLAARAEVLSVSEDSSNDCILSGYEGAYHYGGKDYTASASSSGSSLNGCRRTVLKALKVNESSCTHMKCTFGGVWNGGGGDGQKNLFVASFFFDRAAEAGFADPNKPVAKVRPSDFNDAAKQACQIKVEDTSTYPNVEKDNLPYLCLDLVYQYTLLVDGFGLDPWQEITLVKKVKYQNSLVEAAWPLGSAIEAVSSLA 466
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 3448514 3454891 + Carg19557-RA Car03g00214 144266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00214 466 Pfam GDA1/CD39 (nucleoside phosphatase) family 63 464 IPR000407 GO:0016787
Car03g00214 466 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 187 202 IPR000407 GO:0016787
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00214 Car-Chr3:3448514 Car09g00963 Car-Chr9:6006495 1.56E-178 dispersed
Car03g00214 Car-Chr3:3448514 Car07g01142 Car-Chr7:6862618 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00214 K14641 - csv:101220305 831.632