Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00224 ATGGCTGCCTACGCTTTGCTTGGCGATTCCACTGGACGTGTTAATGGCGGTTTTGATGATAGTCCTTTGACGAGTGCATCGACGAACAGTAACGGCAGTGAAGAACGTAATCATCAACAGACTGTTCAAGTTCAGGTTATTCAGTCGCGAAAAATGGTGCGGAAGAGAATCGCGTCGGAGATGGAGATCGACGGCGGTGGAGTCACTGCATCTGTTCATTCTCGGCTTTCGCGGCGGAGTTTAGGTTCCGATCGTCCTTTTGGTTGTGGAGAAATTAAAGGGAATGTGAATTATTGTTCTTCTTCAAACCCTAGCCATGGCGGTAACCACTCCACTGTGCATAATTTAACCGCTCTGACGTCAGGTGTAATCGAAGGGACAAATTTATCAAATCCTCCTTCTGCTTCTGATGCTACGGCCTCTTCCACTACCTCCAACAATAACAATAACAACAACACGACTCTTCTTGACAGTACTCTTCCTGTTCTTCGTCCTCAGCCCCACCATCACTTGCAGAATCCTGCAGTCTGTGGTTTCTCTGGTTTGCCGTTGTTCCCACCGGAATCGAATCACCACCACAAGTTAAATACTCGGAGTAATCCTTTTCCCCTTCCTAATCCATCTCAGATTCTTCTTCATAATCCTCCCACTACTGCAACATCCTCCATTATCGCCGCCGCTTCTTCTCCCATGGATGATTCCTCCGCCACCGCTTGGATCGACGGCATCATTAAGGACTTAATCCACAGCTCCACCGCCATATCCATTCCTCAGCTTATTCAGAACGTACGTGAGATTATCTACCCCTGTAACCCCAATCTTGCGAACCTTCTTGAGTTTCGTCTTCGTACTTTGACGGAACCTAGTGTTCCTAACTTCGTTGCTGAGGATCACCGATTGAGGAAATCCGCTTTGCCGTTGCCGGCGCCGGTGGCCGGGCTGGGGTTGCAGCAGAGGCAGTTCAATCAAGAACAGCATGAGCAAGAGCATGATTGTTCTGGTTTGAAGCTTAATCTCGATTCTTCTTCTCTGCATAATTTTCCTACTTTCCCCTCTCAGCCACCGTTTCATGAGCCGTATCTTCACTGGGGAGCAACCACTCCACCAGTCCCCACCCCCTCCGGCGAGGATGCCTTACAGCGGCTCCCCGGTCATCATCAACTTAATCTCTCTTCTGTTACACCGTCGTCGCTTGTTTCTCTAAACCATGTCCCTTCAAAGCCACAATCAGAACAGCAGAACTCCTGTCCGGTGAATGTAAAGGCGGCGGTGGCACAGCCGCCGCCAGCGGCAGCGGCTGCGGCAGCGCCACAGCCGAGTAATAACCCTTCAGCCACTGCTTTGCTAATTAGAGAGATTAAAGAGGAAATGAGGCAACAGAAGAGAGACGAAGAAGGGTTACATCTCTTGACATTACTTCTTCAATGTGCCGAAGCCGTTTCTGCTGATAATTTAGAAGAAGCCAACAAGATGCTCTTGGAAATCTCCGAGTTGTCCACACCCTTCGGCACATCGGCACAGAGGGTAGCGGCGTATTTCTCAGAAGCAATGTCGGCGAGGCTTGTAAGCTCATGTTTAGGCATATATGCAGCTCTGCCGCCATCGTTGATGCCCCATACCCACAGCCAGAAGATAGCTTCAGCCTTCCAGGTCTTCAATGGCATAAGCCCATTTGTCAAATTCTCACACTTCACTGCCAATCAAGCCATTCAAGAAGCTTTTGAAAGGGAAGAGAGAGTTCACATTATAGATCTAGACATCATGCAAGGCCTTCAATGGCCTGGTCTCTTCCACATCTTGGCGTCTAGGCCTGGCGGGCCGCCGTATGTCCGCCTTACAGGGCTAGGGACCTCTCAGCAAGTTCTTGAGGCCACTGGCAAGCGCCTCACTGAATTCGCCGAGAAGCTAGGCCTTCCCTTCGATTTCTTCCCTGTGGCTGATAAAATTGGCAATTTAGACTTGGAGAGGCTCAACGTGAGCAAAAGGGAAGCCGTTGCCGTTCATTGGATGCAGCACTCTCTTTATGAAGTCACTGGTTCTGATTCCAATACGCTATGGCTTTTGCAGAGATTGGCCCCAAAAGTGGTGACGGTGGTGGAACAAGATCTAAGCCACACAGGCTCGTTCTTGGGGAGATTCGTAGAGGCCATTCACTACTATTCCGCACTGTTCGACTCATTGGGTGTCAGCTATGGCGAAGAGAGTGAAGAGAGACACTTAGTGGAGCAGCAACTTTTGTCAAGGGAGATCAGAAACGTGCTGGCCGTGGGTGGGCCGTCGAGGACCGGCGAAGTAAAGTTCCAAAACTGGAGAGAAAAGCTACAGCAATCCGGGTTTAAGGGCATTTCTCTCGCCGGAAATGCTGCAACTCAGGCCACTCTCCTCCTCGGAATGTTCCCTTCCGATGGGTATACGCTTGTAGAAGATCATGGGACTCTGAAACTTGGATGGAAGGATCTCTGTTTGCTCACAGCCTCAGCTTGGAAGCCGCCGTTTCATCATCATGCCACCAACAACAACCACATTCCACGGTACTGA 2538 50.08 MAAYALLGDSTGRVNGGFDDSPLTSASTNSNGSEERNHQQTVQVQVIQSRKMVRKRIASEMEIDGGGVTASVHSRLSRRSLGSDRPFGCGEIKGNVNYCSSSNPSHGGNHSTVHNLTALTSGVIEGTNLSNPPSASDATASSTTSNNNNNNNTTLLDSTLPVLRPQPHHHLQNPAVCGFSGLPLFPPESNHHHKLNTRSNPFPLPNPSQILLHNPPTTATSSIIAAASSPMDDSSATAWIDGIIKDLIHSSTAISIPQLIQNVREIIYPCNPNLANLLEFRLRTLTEPSVPNFVAEDHRLRKSALPLPAPVAGLGLQQRQFNQEQHEQEHDCSGLKLNLDSSSLHNFPTFPSQPPFHEPYLHWGATTPPVPTPSGEDALQRLPGHHQLNLSSVTPSSLVSLNHVPSKPQSEQQNSCPVNVKAAVAQPPPAAAAAAAPQPSNNPSATALLIREIKEEMRQQKRDEEGLHLLTLLLQCAEAVSADNLEEANKMLLEISELSTPFGTSAQRVAAYFSEAMSARLVSSCLGIYAALPPSLMPHTHSQKIASAFQVFNGISPFVKFSHFTANQAIQEAFEREERVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSQQVLEATGKRLTEFAEKLGLPFDFFPVADKIGNLDLERLNVSKREAVAVHWMQHSLYEVTGSDSNTLWLLQRLAPKVVTVVEQDLSHTGSFLGRFVEAIHYYSALFDSLGVSYGEESEERHLVEQQLLSREIRNVLAVGGPSRTGEVKFQNWREKLQQSGFKGISLAGNAATQATLLLGMFPSDGYTLVEDHGTLKLGWKDLCLLTASAWKPPFHHHATNNNHIPRY 845
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 3531067 3534456 - Carg19547-RA Car03g00224 144276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00224 845 MobiDBLite consensus disorder prediction 17 40 - -
Car03g00224 845 MobiDBLite consensus disorder prediction 358 378 - -
Car03g00224 845 MobiDBLite consensus disorder prediction 14 40 - -
Car03g00224 845 ProSiteProfiles GRAS family profile. 460 829 IPR005202 -
Car03g00224 845 MobiDBLite consensus disorder prediction 124 158 - -
Car03g00224 845 Pfam GRAS domain family 470 829 IPR005202 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car03g00224 Car07g01146 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00224 Car-Chr3:3531067 Car04g00576 Car-Chr4:3285365 1.89E-160 dispersed
Car03g00224 Car-Chr3:3531067 Car07g01146 Car-Chr7:6895184 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3101 PF03514 GRAS 6.90E-127 CL0063 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00224 - - bhj:120074183 1409.82